HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.3 nTPM
HPA:12.3 nTPM
GTEx:11.8 nTPM
FANTOM5:66.1 Scaled Tags Per Million
Pig:20.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003920
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.3
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
2148 Female, age 91, left hemisphere 13.8
1911 Female, age 85, right hemisphere 12.1
1898 Male, age 80, left hemisphere 11.9
1855 Male, age 76, left hemisphere 11.7
2529 Female, age 94, left hemisphere 11.3
2621 Female, age 67, right hemisphere 11.3
Dentate gyrus
nTPM: 12.0
2528 Male, age 74, both hemispheres 12.9
2531 Female, age 67, both hemispheres 12.7
2246 Female, age 85, both hemispheres 12.4
1927 Female, age 91, both hemispheres 12.2
2530 Female, age 94, left hemisphere 11.0
2010 Male, age 76, both hemispheres 10.8
Entorhinal gyrus
nTPM: 11.3
1938 Female, age 85, left hemisphere 11.8
2117 Female, age 91, right hemisphere 11.4
2686 Male, age 75, right hemisphere 11.4
1787 Male, age 76, left hemisphere 11.1
2613 Female, age 94, left hemisphere 11.0
2764 Male, age 80, right hemisphere 11.0
Hippocampus, CA1
nTPM: 11.9
2749 Male, age 80, left hemisphere 12.9
1873 Female, age 85, both hemispheres 12.7
2527 Male, age 74, both hemispheres 12.6
2082 Female, age 91, right hemisphere 10.8
2045 Male, age 76, both hemispheres 10.5
Hippocampus, CA2
nTPM: 11.9
1963 Male, age 80, left hemisphere 13.8
1892 Male, age 76, both hemispheres 11.8
2113 Female, age 91, right hemisphere 11.7
2437 Female, age 94, left hemisphere 11.7
2249 Male, age 74, both hemispheres 11.6
1940 Female, age 85, left hemisphere 10.8
Hippocampus, CA3
nTPM: 12.3
2137 Male, age 80, left hemisphere 13.5
2861 Female, age 67, both hemispheres 13.0
2620 Female, age 94, left hemisphere 12.7
1891 Female, age 85, both hemispheres 12.2
2436 Male, age 74, both hemispheres 11.8
1867 Male, age 76, both hemispheres 10.8
Parahippocampal cortex
nTPM: 11.4
2692 Male, age 74, both hemispheres 12.4
1850 Male, age 80, both hemispheres 11.8
2532 Female, age 72, left hemisphere 11.5
2693 Female, age 94, both hemispheres 11.5
1933 Female, age 85, both hemispheres 11.4
1990 Female, age 91, right hemisphere 11.4
2250 Female, age 67, right hemisphere 11.2
2622 Female, age 67, right hemisphere 11.2
2245 Female, age 91, both hemispheres 10.9
2018 Male, age 76, both hemispheres 10.8
Perirhinal gyrus
nTPM: 11.3
1794 Male, age 80, right hemisphere 11.9
2848 Male, age 76, right hemisphere 11.5
1841 Female, age 85, right hemisphere 11.4
2521 Female, age 94, right hemisphere 11.0
1847 Female, age 91, left hemisphere 10.8
Subiculum
nTPM: 11.6
2729 Female, age 91, right hemisphere 12.5
2619 Male, age 74, both hemispheres 12.3
2438 Female, age 94, left hemisphere 12.1
1977 Female, age 85, both hemispheres 11.3
1901 Male, age 80, both hemispheres 11.2
2042 Male, age 76, both hemispheres 10.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 19.9
Min nTPM: 3.1
Std nTPM: 2.7
Median nTPM: 11.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 19.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 19.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 19.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 18.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 18.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 17.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 17.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 17.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 17.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 17.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 16.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.1
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 60.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 20.9
Min nTPM: 18.5
Sample A Female 19.4
Sample B Female 18.9
Sample C Male 18.5
Sample D Male 20.9
Entorhinal cortex
nTPM: 20.9
Samples: 4

Max nTPM: 23.8
Min nTPM: 19.1
Sample A Female 23.8
Sample B Female 19.9
Sample C Male 19.1
Sample D Male 20.9
Subiculum
nTPM: 17.4
Samples: 4

Max nTPM: 20.5
Min nTPM: 15.3
Sample A Female 20.5
Sample B Female 16.4
Sample C Male 17.2
Sample D Male 15.3
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 20.9
Min nTPM: 15.4
Sample A Female 18.3
Sample B Female 15.4
Sample C Male 20.9
Sample D Male 17.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.