HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.1 nTPM
HPA:15.1 nTPM
GTEx:11.0 nTPM
FANTOM5:37.2 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:15.3 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB027355Antibody CAB037310
Glial cells LowLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 13.6
2148 Female, age 91, left hemisphere 15.2
2621 Female, age 67, right hemisphere 15.2
1855 Male, age 76, left hemisphere 15.0
1911 Female, age 85, right hemisphere 12.1
2529 Female, age 94, left hemisphere 12.1
1898 Male, age 80, left hemisphere 11.9
Dentate gyrus
nTPM: 14.3
2531 Female, age 67, both hemispheres 16.2
2246 Female, age 85, both hemispheres 15.5
1927 Female, age 91, both hemispheres 15.0
2528 Male, age 74, both hemispheres 14.5
2010 Male, age 76, both hemispheres 12.6
2530 Female, age 94, left hemisphere 11.7
Entorhinal gyrus
nTPM: 14.9
1787 Male, age 76, left hemisphere 16.8
2613 Female, age 94, left hemisphere 15.4
1938 Female, age 85, left hemisphere 14.7
2764 Male, age 80, right hemisphere 14.7
2117 Female, age 91, right hemisphere 14.6
2686 Male, age 75, right hemisphere 13.0
Hippocampus, CA1
nTPM: 13.7
2045 Male, age 76, both hemispheres 16.8
2082 Female, age 91, right hemisphere 14.6
2527 Male, age 74, both hemispheres 13.1
2749 Male, age 80, left hemisphere 12.6
1873 Female, age 85, both hemispheres 11.6
Hippocampus, CA2
nTPM: 14.1
1940 Female, age 85, left hemisphere 18.5
2113 Female, age 91, right hemisphere 14.2
1963 Male, age 80, left hemisphere 14.1
2437 Female, age 94, left hemisphere 14.0
2249 Male, age 74, both hemispheres 12.3
1892 Male, age 76, both hemispheres 11.5
Hippocampus, CA3
nTPM: 13.5
2620 Female, age 94, left hemisphere 17.1
2861 Female, age 67, both hemispheres 15.2
2436 Male, age 74, both hemispheres 12.9
2137 Male, age 80, left hemisphere 12.1
1867 Male, age 76, both hemispheres 11.8
1891 Female, age 85, both hemispheres 11.8
Parahippocampal cortex
nTPM: 15.1
2250 Female, age 67, right hemisphere 19.2
2018 Male, age 76, both hemispheres 17.1
2693 Female, age 94, both hemispheres 16.1
2622 Female, age 67, right hemisphere 15.5
1990 Female, age 91, right hemisphere 14.8
2245 Female, age 91, both hemispheres 14.7
2532 Female, age 72, left hemisphere 14.4
2692 Male, age 74, both hemispheres 13.5
1850 Male, age 80, both hemispheres 13.2
1933 Female, age 85, both hemispheres 13.0
Perirhinal gyrus
nTPM: 14.4
1794 Male, age 80, right hemisphere 15.6
1847 Female, age 91, left hemisphere 15.2
2848 Male, age 76, right hemisphere 15.0
2521 Female, age 94, right hemisphere 14.0
1841 Female, age 85, right hemisphere 12.0
Subiculum
nTPM: 13.6
2729 Female, age 91, right hemisphere 17.7
2619 Male, age 74, both hemispheres 15.2
2438 Female, age 94, left hemisphere 12.6
2042 Male, age 76, both hemispheres 12.5
1977 Female, age 85, both hemispheres 12.3
1901 Male, age 80, both hemispheres 11.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.0
Samples: 197

Max nTPM: 21.8
Min nTPM: 3.8
Std nTPM: 3.5
Median nTPM: 10.7
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 21.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 21.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 19.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 19.5
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 19.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 18.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 18.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 17.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 17.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 17.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 17.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.2
FF:10169-103B7 60 years, female 46.0
FF:10153-102I9 76 years, female 28.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.0
Sample A Female 10.3
Sample B Female 10.1
Sample C Male 8.0
Sample D Male 8.2
Entorhinal cortex
nTPM: 6.2
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.2
Sample A Female 6.4
Sample B Female 6.3
Sample C Male 6.9
Sample D Male 5.2
Subiculum
nTPM: 7.4
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.6
Sample A Female 8.1
Sample B Female 7.2
Sample C Male 7.8
Sample D Male 6.6
Ventral hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 11.9
Min nTPM: 7.4
Sample A Female 11.0
Sample B Female 7.4
Sample C Male 11.9
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.4
Samples: 4

Max nTPM: 16.5
Min nTPM: 12.0
Sample A Male 16.5
Sample B Male 12.0
Sample C Female 13.0
Sample D Female 12.0
Hippocampal formation
nTPM: 15.3
Samples: 4

Max nTPM: 16.9
Min nTPM: 14.2
Sample A Male 16.9
Sample B Male 14.2
Sample C Female 15.1
Sample D Female 14.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
71610882 Antisense, RP_050927_02_A12, Mouse strain C57BL/6J (56 days, male) 4.6

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