HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.3 nTPM
HPA:39.3 nTPM
GTEx:45.0 nTPM
FANTOM5:105.4 Scaled Tags Per Million
Pig:71.5 nTPM
Mouse:106.3 nTPM
Allen mouse:12.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054105
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.3
Sample id Sample description nTPM
Hippocampus
nTPM: 38.2
2621 Female, age 67, right hemisphere 64.7
2529 Female, age 94, left hemisphere 48.4
1911 Female, age 85, right hemisphere 36.6
2148 Female, age 91, left hemisphere 32.0
1898 Male, age 80, left hemisphere 24.5
1855 Male, age 76, left hemisphere 22.9
Dentate gyrus
nTPM: 28.5
2531 Female, age 67, both hemispheres 47.2
1927 Female, age 91, both hemispheres 32.7
2246 Female, age 85, both hemispheres 29.2
2530 Female, age 94, left hemisphere 28.2
2528 Male, age 74, both hemispheres 20.0
2010 Male, age 76, both hemispheres 14.0
Entorhinal gyrus
nTPM: 33.4
2613 Female, age 94, left hemisphere 64.1
2686 Male, age 75, right hemisphere 33.7
1938 Female, age 85, left hemisphere 31.2
2764 Male, age 80, right hemisphere 28.7
1787 Male, age 76, left hemisphere 27.6
2117 Female, age 91, right hemisphere 15.5
Hippocampus, CA1
nTPM: 36.0
2749 Male, age 80, left hemisphere 59.6
2527 Male, age 74, both hemispheres 53.0
2082 Female, age 91, right hemisphere 28.2
1873 Female, age 85, both hemispheres 23.8
2045 Male, age 76, both hemispheres 15.2
Hippocampus, CA2
nTPM: 29.4
2437 Female, age 94, left hemisphere 34.2
2113 Female, age 91, right hemisphere 33.8
1963 Male, age 80, left hemisphere 32.9
1940 Female, age 85, left hemisphere 27.5
2249 Male, age 74, both hemispheres 26.8
1892 Male, age 76, both hemispheres 21.1
Hippocampus, CA3
nTPM: 39.3
2137 Male, age 80, left hemisphere 70.0
2861 Female, age 67, both hemispheres 56.9
2620 Female, age 94, left hemisphere 41.3
2436 Male, age 74, both hemispheres 28.7
1867 Male, age 76, both hemispheres 20.1
1891 Female, age 85, both hemispheres 18.9
Parahippocampal cortex
nTPM: 35.4
2245 Female, age 91, both hemispheres 64.5
2622 Female, age 67, right hemisphere 46.0
2250 Female, age 67, right hemisphere 43.7
2692 Male, age 74, both hemispheres 33.2
2693 Female, age 94, both hemispheres 32.4
2532 Female, age 72, left hemisphere 29.6
1933 Female, age 85, both hemispheres 29.5
1990 Female, age 91, right hemisphere 27.7
1850 Male, age 80, both hemispheres 24.4
2018 Male, age 76, both hemispheres 22.7
Perirhinal gyrus
nTPM: 32.6
1847 Female, age 91, left hemisphere 41.7
2521 Female, age 94, right hemisphere 41.5
1794 Male, age 80, right hemisphere 30.0
1841 Female, age 85, right hemisphere 27.3
2848 Male, age 76, right hemisphere 22.7
Subiculum
nTPM: 26.2
2619 Male, age 74, both hemispheres 36.1
1901 Male, age 80, both hemispheres 32.7
2438 Female, age 94, left hemisphere 30.5
1977 Female, age 85, both hemispheres 24.3
2042 Male, age 76, both hemispheres 20.5
2729 Female, age 91, right hemisphere 13.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.0
Samples: 197

Max nTPM: 178.2
Min nTPM: 14.6
Std nTPM: 20.8
Median nTPM: 41.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 178.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 112.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 109.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 98.5
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 89.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 88.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 87.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 86.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 85.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 82.5
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 82.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.4
FF:10153-102I9 76 years, female 120.9
FF:10169-103B7 60 years, female 89.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.7
Samples: 4

Max nTPM: 50.1
Min nTPM: 34.3
Sample A Female 50.1
Sample B Female 48.1
Sample C Male 46.2
Sample D Male 34.3
Entorhinal cortex
nTPM: 71.5
Samples: 4

Max nTPM: 75.8
Min nTPM: 62.8
Sample A Female 75.3
Sample B Female 62.8
Sample C Male 75.8
Sample D Male 72.1
Subiculum
nTPM: 64.2
Samples: 4

Max nTPM: 81.5
Min nTPM: 55.8
Sample A Female 81.5
Sample B Female 58.5
Sample C Male 60.8
Sample D Male 55.8
Ventral hippocampus
nTPM: 50.3
Samples: 4

Max nTPM: 63.0
Min nTPM: 37.9
Sample A Female 39.3
Sample B Female 37.9
Sample C Male 60.8
Sample D Male 63.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 106.3
Samples: 4

Max nTPM: 125.2
Min nTPM: 96.0
Sample A Male 105.0
Sample B Male 99.0
Sample C Female 96.0
Sample D Female 125.2
Hippocampal formation
nTPM: 93.8
Samples: 4

Max nTPM: 100.1
Min nTPM: 88.4
Sample A Male 88.4
Sample B Male 93.3
Sample C Female 100.1
Sample D Female 93.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.8
68499267 Antisense, RP_050118_01_C03, Mouse strain C57BL/6J (56 days, male) 12.8

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