COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:9.6 nTPM
HPA:7.0 nTPM
GTEx:9.6 nTPM
FANTOM5:32.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 7.0
overview
Male, age 54 		Colon sample 67
nTPM: 7.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 1.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 3.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 7.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 22.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 6.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 2.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 14.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 0.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 3.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 13.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 9.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 9.6
Samples: 373

Max nTPM: 212.2
Min nTPM: 0.5
Std nTPM: 15.6
Median nTPM: 5.8
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 212.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 105.9
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 103.7
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 81.2
GTEX-1J1R8-1426-SM-CL55O 40-49 years, male 71.8
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 60.7
GTEX-1PPH8-2226-SM-EWRN7 20-29 years, male 45.7
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 44.6
GTEX-1LVAM-1726-SM-DHXKQ 50-59 years, female 41.2
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 36.9
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 36.2
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Colon - Transverse
Average nTPM: 9.3
Samples: 406

Max nTPM: 193.7
Min nTPM: 0.4
Std nTPM: 17.3
Median nTPM: 5.0
GTEX-OHPN-2026-SM-E9TIA 60-69 years, female 193.7
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 169.1
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 138.5
GTEX-1PWST-2426-SM-EWRMP 70-79 years, male 91.9
GTEX-1C475-1626-SM-731FP 40-49 years, female 72.2
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 72.0
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 65.6
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 57.5
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 46.7
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 45.4
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 43.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 32.5
FF:10014-101C5 62,83,84 years, mixed 32.5

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.