HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.7 nTPM
HPA:16.7 nTPM
GTEx:13.8 nTPM
FANTOM5:48.3 Scaled Tags Per Million
Pig:28.5 nTPM
Mouse:36.4 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017235Antibody HPA076042
Glial cells LowNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.7
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
1898 Male, age 80, left hemisphere 14.2
1855 Male, age 76, left hemisphere 12.1
1911 Female, age 85, right hemisphere 12.0
2148 Female, age 91, left hemisphere 12.0
2621 Female, age 67, right hemisphere 11.7
2529 Female, age 94, left hemisphere 10.1
Dentate gyrus
nTPM: 12.9
1927 Female, age 91, both hemispheres 16.2
2010 Male, age 76, both hemispheres 14.9
2528 Male, age 74, both hemispheres 12.4
2246 Female, age 85, both hemispheres 12.1
2531 Female, age 67, both hemispheres 11.6
2530 Female, age 94, left hemisphere 10.2
Entorhinal gyrus
nTPM: 13.0
1938 Female, age 85, left hemisphere 15.2
2117 Female, age 91, right hemisphere 13.4
2764 Male, age 80, right hemisphere 13.3
1787 Male, age 76, left hemisphere 12.9
2613 Female, age 94, left hemisphere 11.9
2686 Male, age 75, right hemisphere 11.5
Hippocampus, CA1
nTPM: 13.9
2045 Male, age 76, both hemispheres 14.4
2749 Male, age 80, left hemisphere 14.2
2082 Female, age 91, right hemisphere 13.8
1873 Female, age 85, both hemispheres 13.7
2527 Male, age 74, both hemispheres 13.2
Hippocampus, CA2
nTPM: 13.4
2249 Male, age 74, both hemispheres 15.0
1892 Male, age 76, both hemispheres 14.4
1940 Female, age 85, left hemisphere 13.5
1963 Male, age 80, left hemisphere 12.7
2113 Female, age 91, right hemisphere 12.5
2437 Female, age 94, left hemisphere 12.4
Hippocampus, CA3
nTPM: 13.7
2436 Male, age 74, both hemispheres 18.8
1891 Female, age 85, both hemispheres 14.5
1867 Male, age 76, both hemispheres 13.6
2137 Male, age 80, left hemisphere 13.0
2620 Female, age 94, left hemisphere 11.4
2861 Female, age 67, both hemispheres 11.1
Parahippocampal cortex
nTPM: 14.5
2693 Female, age 94, both hemispheres 18.4
1850 Male, age 80, both hemispheres 18.0
2250 Female, age 67, right hemisphere 15.9
1933 Female, age 85, both hemispheres 14.7
2018 Male, age 76, both hemispheres 14.3
1990 Female, age 91, right hemisphere 14.0
2692 Male, age 74, both hemispheres 13.4
2245 Female, age 91, both hemispheres 13.3
2532 Female, age 72, left hemisphere 12.5
2622 Female, age 67, right hemisphere 10.8
Perirhinal gyrus
nTPM: 16.7
1841 Female, age 85, right hemisphere 18.8
1794 Male, age 80, right hemisphere 16.9
2848 Male, age 76, right hemisphere 16.7
1847 Female, age 91, left hemisphere 16.1
2521 Female, age 94, right hemisphere 15.2
Subiculum
nTPM: 12.8
1901 Male, age 80, both hemispheres 13.7
1977 Female, age 85, both hemispheres 13.6
2438 Female, age 94, left hemisphere 13.3
2729 Female, age 91, right hemisphere 12.2
2619 Male, age 74, both hemispheres 12.0
2042 Male, age 76, both hemispheres 11.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.8
Samples: 197

Max nTPM: 26.8
Min nTPM: 9.2
Std nTPM: 2.6
Median nTPM: 13.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 26.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 22.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 22.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 20.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 20.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 20.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 20.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 19.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 19.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 18.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 18.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.3
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 40.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.5
Samples: 4

Max nTPM: 30.9
Min nTPM: 26.0
Sample A Female 30.9
Sample B Female 27.1
Sample C Male 30.0
Sample D Male 26.0
Entorhinal cortex
nTPM: 27.5
Samples: 4

Max nTPM: 29.5
Min nTPM: 26.1
Sample A Female 28.2
Sample B Female 29.5
Sample C Male 26.2
Sample D Male 26.1
Subiculum
nTPM: 27.4
Samples: 4

Max nTPM: 30.9
Min nTPM: 25.1
Sample A Female 30.9
Sample B Female 26.1
Sample C Male 27.4
Sample D Male 25.1
Ventral hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 27.9
Min nTPM: 24.5
Sample A Female 26.7
Sample B Female 24.8
Sample C Male 24.5
Sample D Male 27.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.8
Samples: 4

Max nTPM: 36.7
Min nTPM: 31.7
Sample A Male 31.7
Sample B Male 36.7
Sample C Female 35.0
Sample D Female 35.7
Hippocampal formation
nTPM: 36.4
Samples: 4

Max nTPM: 40.4
Min nTPM: 33.2
Sample A Male 40.4
Sample B Male 37.6
Sample C Female 34.3
Sample D Female 33.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
68797498 Antisense, RP_050125_02_E09, Mouse strain C57BL/6J (56 days, male) 4.6

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