HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:7.1 nTPM
HPA:7.1 nTPM
GTEx:16.7 nTPM
FANTOM5:99.6 Scaled Tags Per Million
Pig:78.0 nTPM
Mouse:83.5 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028605
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.1
Sample id Sample description nTPM
Hippocampus
nTPM: 0.0
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 0.0
2530 Female, age 94, left hemisphere 0.1
1927 Female, age 91, both hemispheres 0.0
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 1.5
2613 Female, age 94, left hemisphere 7.3
2764 Male, age 80, right hemisphere 1.8
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.0
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 0.8
2437 Female, age 94, left hemisphere 5.2
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 0.0
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 1.4
2245 Female, age 91, both hemispheres 7.1
2532 Female, age 72, left hemisphere 3.5
1990 Female, age 91, right hemisphere 2.4
2693 Female, age 94, both hemispheres 1.2
1850 Male, age 80, both hemispheres 0.0
1933 Female, age 85, both hemispheres 0.0
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2622 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 7.1
2521 Female, age 94, right hemisphere 16.6
1847 Female, age 91, left hemisphere 9.2
1794 Male, age 80, right hemisphere 8.4
1841 Female, age 85, right hemisphere 1.3
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 1.9
2438 Female, age 94, left hemisphere 11.9
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.7
Samples: 197

Max nTPM: 60.7
Min nTPM: 1.5
Std nTPM: 11.2
Median nTPM: 13.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 60.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 59.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 55.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 49.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 47.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 46.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 44.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 44.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 43.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 43.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 40.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.6
FF:10169-103B7 60 years, female 113.0
FF:10153-102I9 76 years, female 86.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 78.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 78.0
Samples: 4

Max nTPM: 92.5
Min nTPM: 54.2
Sample A Female 92.5
Sample B Female 79.7
Sample C Male 85.7
Sample D Male 54.2
Entorhinal cortex
nTPM: 61.3
Samples: 4

Max nTPM: 66.1
Min nTPM: 54.1
Sample A Female 66.1
Sample B Female 65.1
Sample C Male 54.1
Sample D Male 59.7
Subiculum
nTPM: 65.4
Samples: 4

Max nTPM: 87.3
Min nTPM: 53.1
Sample A Female 87.3
Sample B Female 59.3
Sample C Male 61.7
Sample D Male 53.1
Ventral hippocampus
nTPM: 66.1
Samples: 4

Max nTPM: 83.4
Min nTPM: 49.4
Sample A Female 63.1
Sample B Female 49.4
Sample C Male 68.5
Sample D Male 83.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 83.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.5
Samples: 4

Max nTPM: 88.7
Min nTPM: 71.3
Sample A Male 86.7
Sample B Male 88.7
Sample C Female 71.3
Sample D Female 87.3
Hippocampal formation
nTPM: 73.3
Samples: 4

Max nTPM: 83.4
Min nTPM: 65.2
Sample A Male 65.2
Sample B Male 72.8
Sample C Female 83.4
Sample D Female 71.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
72283605 Antisense, RP_051019_01_G02, Mouse strain C57BL/6J (56 days, male) 12.4

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