HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.7 nTPM
HPA:19.7 nTPM
GTEx:18.4 nTPM
FANTOM5:18.4 Scaled Tags Per Million
Pig:50.2 nTPM
Mouse:72.2 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001733
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 13.3
1898 Male, age 80, left hemisphere 16.8
2621 Female, age 67, right hemisphere 14.4
2148 Female, age 91, left hemisphere 14.1
1855 Male, age 76, left hemisphere 12.5
1911 Female, age 85, right hemisphere 12.4
2529 Female, age 94, left hemisphere 9.7
Dentate gyrus
nTPM: 14.6
1927 Female, age 91, both hemispheres 22.8
2531 Female, age 67, both hemispheres 14.5
2010 Male, age 76, both hemispheres 13.8
2246 Female, age 85, both hemispheres 13.5
2530 Female, age 94, left hemisphere 12.3
2528 Male, age 74, both hemispheres 10.9
Entorhinal gyrus
nTPM: 13.7
2613 Female, age 94, left hemisphere 19.1
2764 Male, age 80, right hemisphere 14.7
1938 Female, age 85, left hemisphere 14.6
1787 Male, age 76, left hemisphere 14.2
2686 Male, age 75, right hemisphere 11.7
2117 Female, age 91, right hemisphere 7.7
Hippocampus, CA1
nTPM: 19.5
2749 Male, age 80, left hemisphere 41.9
1873 Female, age 85, both hemispheres 17.1
2045 Male, age 76, both hemispheres 15.6
2527 Male, age 74, both hemispheres 13.0
2082 Female, age 91, right hemisphere 9.7
Hippocampus, CA2
nTPM: 14.2
1892 Male, age 76, both hemispheres 21.5
1963 Male, age 80, left hemisphere 20.0
2437 Female, age 94, left hemisphere 12.0
2249 Male, age 74, both hemispheres 11.3
1940 Female, age 85, left hemisphere 10.6
2113 Female, age 91, right hemisphere 9.7
Hippocampus, CA3
nTPM: 19.7
2137 Male, age 80, left hemisphere 39.1
2620 Female, age 94, left hemisphere 21.0
1867 Male, age 76, both hemispheres 18.8
2861 Female, age 67, both hemispheres 15.5
1891 Female, age 85, both hemispheres 12.1
2436 Male, age 74, both hemispheres 11.9
Parahippocampal cortex
nTPM: 12.6
2245 Female, age 91, both hemispheres 16.2
1850 Male, age 80, both hemispheres 14.5
1990 Female, age 91, right hemisphere 14.5
2693 Female, age 94, both hemispheres 12.8
1933 Female, age 85, both hemispheres 12.5
2250 Female, age 67, right hemisphere 12.4
2532 Female, age 72, left hemisphere 11.4
2018 Male, age 76, both hemispheres 11.3
2622 Female, age 67, right hemisphere 10.7
2692 Male, age 74, both hemispheres 9.5
Perirhinal gyrus
nTPM: 15.6
1847 Female, age 91, left hemisphere 20.3
2521 Female, age 94, right hemisphere 15.6
1794 Male, age 80, right hemisphere 15.4
1841 Female, age 85, right hemisphere 14.0
2848 Male, age 76, right hemisphere 13.0
Subiculum
nTPM: 12.6
1901 Male, age 80, both hemispheres 19.7
1977 Female, age 85, both hemispheres 13.6
2042 Male, age 76, both hemispheres 12.8
2438 Female, age 94, left hemisphere 11.5
2619 Male, age 74, both hemispheres 9.4
2729 Female, age 91, right hemisphere 8.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.4
Samples: 197

Max nTPM: 50.4
Min nTPM: 2.7
Std nTPM: 9.9
Median nTPM: 17.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 50.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 49.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 45.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 43.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 43.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 41.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 41.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 37.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 37.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.4
FF:10169-103B7 60 years, female 24.0
FF:10153-102I9 76 years, female 12.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.3
Samples: 4

Max nTPM: 58.8
Min nTPM: 38.3
Sample A Female 58.8
Sample B Female 56.4
Sample C Male 38.3
Sample D Male 47.5
Entorhinal cortex
nTPM: 39.5
Samples: 4

Max nTPM: 46.2
Min nTPM: 34.3
Sample A Female 46.2
Sample B Female 39.9
Sample C Male 37.6
Sample D Male 34.3
Subiculum
nTPM: 38.3
Samples: 4

Max nTPM: 47.9
Min nTPM: 33.5
Sample A Female 47.9
Sample B Female 35.1
Sample C Male 36.5
Sample D Male 33.5
Ventral hippocampus
nTPM: 44.6
Samples: 4

Max nTPM: 58.3
Min nTPM: 32.8
Sample A Female 42.6
Sample B Female 32.8
Sample C Male 44.8
Sample D Male 58.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 72.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.7
Samples: 4

Max nTPM: 81.0
Min nTPM: 59.1
Sample A Male 59.1
Sample B Male 63.0
Sample C Female 59.5
Sample D Female 81.0
Hippocampal formation
nTPM: 72.2
Samples: 4

Max nTPM: 85.2
Min nTPM: 61.5
Sample A Male 61.5
Sample B Male 80.4
Sample C Female 85.2
Sample D Female 61.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
71496441 Antisense, RP_050913_04_E10, Mouse strain C57BL/6J (56 days, male) 3.7

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