HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.9 nTPM
HPA:27.9 nTPM
GTEx:13.0 nTPM
FANTOM5:86.6 Scaled Tags Per Million
Pig:38.9 nTPM
Mouse:37.8 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042933Antibody CAB010184
Glial cells MediumLow
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 26.4
1898 Male, age 80, left hemisphere 28.4
2529 Female, age 94, left hemisphere 27.8
2148 Female, age 91, left hemisphere 26.4
1855 Male, age 76, left hemisphere 26.1
2621 Female, age 67, right hemisphere 25.3
1911 Female, age 85, right hemisphere 24.2
Dentate gyrus
nTPM: 25.3
2010 Male, age 76, both hemispheres 28.9
2246 Female, age 85, both hemispheres 26.0
1927 Female, age 91, both hemispheres 24.8
2528 Male, age 74, both hemispheres 24.7
2530 Female, age 94, left hemisphere 24.5
2531 Female, age 67, both hemispheres 23.1
Entorhinal gyrus
nTPM: 26.9
2117 Female, age 91, right hemisphere 28.8
2686 Male, age 75, right hemisphere 28.4
1938 Female, age 85, left hemisphere 26.8
1787 Male, age 76, left hemisphere 26.7
2764 Male, age 80, right hemisphere 26.7
2613 Female, age 94, left hemisphere 24.0
Hippocampus, CA1
nTPM: 25.5
2045 Male, age 76, both hemispheres 27.8
2527 Male, age 74, both hemispheres 25.3
2749 Male, age 80, left hemisphere 25.0
1873 Female, age 85, both hemispheres 24.9
2082 Female, age 91, right hemisphere 24.4
Hippocampus, CA2
nTPM: 25.5
2249 Male, age 74, both hemispheres 26.2
1892 Male, age 76, both hemispheres 26.1
2113 Female, age 91, right hemisphere 25.8
1940 Female, age 85, left hemisphere 25.6
1963 Male, age 80, left hemisphere 25.2
2437 Female, age 94, left hemisphere 24.3
Hippocampus, CA3
nTPM: 26.3
1867 Male, age 76, both hemispheres 28.4
2620 Female, age 94, left hemisphere 28.1
1891 Female, age 85, both hemispheres 27.8
2137 Male, age 80, left hemisphere 24.6
2861 Female, age 67, both hemispheres 24.6
2436 Male, age 74, both hemispheres 24.3
Parahippocampal cortex
nTPM: 26.5
2018 Male, age 76, both hemispheres 29.3
1850 Male, age 80, both hemispheres 28.7
1990 Female, age 91, right hemisphere 26.7
1933 Female, age 85, both hemispheres 26.5
2692 Male, age 74, both hemispheres 26.3
2250 Female, age 67, right hemisphere 26.2
2693 Female, age 94, both hemispheres 26.2
2622 Female, age 67, right hemisphere 25.8
2532 Female, age 72, left hemisphere 25.3
2245 Female, age 91, both hemispheres 24.4
Perirhinal gyrus
nTPM: 27.9
2848 Male, age 76, right hemisphere 29.5
1841 Female, age 85, right hemisphere 29.4
1794 Male, age 80, right hemisphere 27.4
1847 Female, age 91, left hemisphere 26.8
2521 Female, age 94, right hemisphere 26.5
Subiculum
nTPM: 26.6
2438 Female, age 94, left hemisphere 27.6
1977 Female, age 85, both hemispheres 27.4
2042 Male, age 76, both hemispheres 27.3
1901 Male, age 80, both hemispheres 26.5
2729 Female, age 91, right hemisphere 26.2
2619 Male, age 74, both hemispheres 24.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.0
Samples: 197

Max nTPM: 46.9
Min nTPM: 3.6
Std nTPM: 5.9
Median nTPM: 12.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 46.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 45.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 28.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 27.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 26.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 25.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 25.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 25.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 24.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 23.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 23.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.6
FF:10153-102I9 76 years, female 107.3
FF:10169-103B7 60 years, female 65.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 43.2
Min nTPM: 35.4
Sample A Female 43.2
Sample B Female 37.7
Sample C Male 39.3
Sample D Male 35.4
Entorhinal cortex
nTPM: 35.0
Samples: 4

Max nTPM: 38.5
Min nTPM: 31.2
Sample A Female 35.6
Sample B Female 38.5
Sample C Male 34.8
Sample D Male 31.2
Subiculum
nTPM: 38.7
Samples: 4

Max nTPM: 40.6
Min nTPM: 36.4
Sample A Female 40.6
Sample B Female 38.2
Sample C Male 36.4
Sample D Male 39.4
Ventral hippocampus
nTPM: 38.4
Samples: 4

Max nTPM: 45.6
Min nTPM: 32.0
Sample A Female 45.6
Sample B Female 39.2
Sample C Male 32.0
Sample D Male 36.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.9
Samples: 4

Max nTPM: 36.8
Min nTPM: 33.2
Sample A Male 35.1
Sample B Male 33.2
Sample C Female 36.8
Sample D Female 34.3
Hippocampal formation
nTPM: 37.8
Samples: 4

Max nTPM: 41.8
Min nTPM: 36.1
Sample A Male 36.9
Sample B Male 41.8
Sample C Female 36.3
Sample D Female 36.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68498956 Antisense, RP_050113_02_F10, Mouse strain C57BL/6J (56 days, male) 1.3

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