HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:55.0 nTPM
HPA:55.0 nTPM
GTEx:68.0 nTPM
FANTOM5:154.7 Scaled Tags Per Million
Pig:79.0 nTPM
Mouse:117.6 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064784
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.0
Sample id Sample description nTPM
Hippocampus
nTPM: 50.7
1911 Female, age 85, right hemisphere 54.9
1898 Male, age 80, left hemisphere 53.3
1855 Male, age 76, left hemisphere 52.7
2621 Female, age 67, right hemisphere 51.3
2529 Female, age 94, left hemisphere 47.4
2148 Female, age 91, left hemisphere 44.6
Dentate gyrus
nTPM: 49.5
2530 Female, age 94, left hemisphere 57.8
2010 Male, age 76, both hemispheres 53.9
2528 Male, age 74, both hemispheres 50.7
2246 Female, age 85, both hemispheres 46.4
1927 Female, age 91, both hemispheres 45.9
2531 Female, age 67, both hemispheres 42.4
Entorhinal gyrus
nTPM: 47.8
2117 Female, age 91, right hemisphere 59.9
1938 Female, age 85, left hemisphere 51.8
1787 Male, age 76, left hemisphere 48.8
2764 Male, age 80, right hemisphere 47.1
2613 Female, age 94, left hemisphere 41.5
2686 Male, age 75, right hemisphere 37.5
Hippocampus, CA1
nTPM: 47.6
2527 Male, age 74, both hemispheres 51.0
1873 Female, age 85, both hemispheres 49.1
2045 Male, age 76, both hemispheres 48.9
2082 Female, age 91, right hemisphere 45.4
2749 Male, age 80, left hemisphere 43.6
Hippocampus, CA2
nTPM: 52.0
2249 Male, age 74, both hemispheres 58.6
2437 Female, age 94, left hemisphere 52.0
1940 Female, age 85, left hemisphere 51.5
1963 Male, age 80, left hemisphere 51.0
2113 Female, age 91, right hemisphere 50.7
1892 Male, age 76, both hemispheres 48.1
Hippocampus, CA3
nTPM: 46.2
1891 Female, age 85, both hemispheres 60.2
2436 Male, age 74, both hemispheres 54.5
1867 Male, age 76, both hemispheres 51.4
2137 Male, age 80, left hemisphere 41.9
2620 Female, age 94, left hemisphere 37.7
2861 Female, age 67, both hemispheres 31.5
Parahippocampal cortex
nTPM: 48.2
1850 Male, age 80, both hemispheres 54.2
2532 Female, age 72, left hemisphere 53.8
2018 Male, age 76, both hemispheres 51.5
1990 Female, age 91, right hemisphere 51.4
1933 Female, age 85, both hemispheres 50.8
2692 Male, age 74, both hemispheres 50.0
2245 Female, age 91, both hemispheres 45.6
2250 Female, age 67, right hemisphere 44.3
2693 Female, age 94, both hemispheres 44.1
2622 Female, age 67, right hemisphere 36.1
Perirhinal gyrus
nTPM: 45.8
1841 Female, age 85, right hemisphere 46.9
2848 Male, age 76, right hemisphere 46.8
2521 Female, age 94, right hemisphere 46.6
1794 Male, age 80, right hemisphere 44.8
1847 Female, age 91, left hemisphere 43.7
Subiculum
nTPM: 55.0
2042 Male, age 76, both hemispheres 64.7
1901 Male, age 80, both hemispheres 58.3
1977 Female, age 85, both hemispheres 53.8
2438 Female, age 94, left hemisphere 53.8
2619 Male, age 74, both hemispheres 49.6
2729 Female, age 91, right hemisphere 49.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.0
Samples: 197

Max nTPM: 165.5
Min nTPM: 23.5
Std nTPM: 29.8
Median nTPM: 60.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 165.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 160.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 152.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 144.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 137.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 135.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 134.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 134.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 133.5
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 131.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 124.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 154.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 154.7
FF:10153-102I9 76 years, female 168.2
FF:10169-103B7 60 years, female 141.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 79.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 79.0
Samples: 4

Max nTPM: 112.1
Min nTPM: 41.3
Sample A Female 112.1
Sample B Female 68.7
Sample C Male 93.7
Sample D Male 41.3
Entorhinal cortex
nTPM: 43.1
Samples: 4

Max nTPM: 55.4
Min nTPM: 34.7
Sample A Female 37.6
Sample B Female 55.4
Sample C Male 44.7
Sample D Male 34.7
Subiculum
nTPM: 47.4
Samples: 4

Max nTPM: 53.4
Min nTPM: 42.2
Sample A Female 53.4
Sample B Female 47.7
Sample C Male 42.2
Sample D Male 46.3
Ventral hippocampus
nTPM: 56.1
Samples: 4

Max nTPM: 71.2
Min nTPM: 42.8
Sample A Female 71.2
Sample B Female 42.8
Sample C Male 44.9
Sample D Male 65.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 117.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.5
Samples: 4

Max nTPM: 109.6
Min nTPM: 78.8
Sample A Male 109.6
Sample B Male 103.9
Sample C Female 101.5
Sample D Female 78.8
Hippocampal formation
nTPM: 117.6
Samples: 4

Max nTPM: 128.5
Min nTPM: 109.7
Sample A Male 119.7
Sample B Male 109.7
Sample C Female 128.5
Sample D Female 112.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
69028348 Antisense, RP_050316_01_B05, Mouse strain C57BL/6J (56 days, male) 6.3
72109423 Antisense, RP_050712_03_E09, Mouse strain C57BL/6J (56 days, male) 4.9
70813281 Antisense, RP_050712_03_E09, Mouse strain C57BL/6J (56 days, male) 2.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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