COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:78.9 nTPM
HPA:15.9 nTPM
GTEx:78.9 nTPM
FANTOM5:26.3 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 15.9
overview
Male, age 54 		Colon sample 67
nTPM: 16.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 13.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 10.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 14.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 17.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 18.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 9.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 10.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 23.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 16
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 16.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 33.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 78.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 78.9
Samples: 373

Max nTPM: 212.8
Min nTPM: 12.9
Std nTPM: 36.2
Median nTPM: 73.8
GTEX-1QCLY-2026-SM-EVR4C 30-39 years, male 212.8
GTEX-1A32A-2626-SM-73KX9 50-59 years, female 177.0
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 175.1
GTEX-16XZZ-2726-SM-7EWDO 60-69 years, male 172.8
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 172.8
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 158.1
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 157.2
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 155.8
GTEX-1J8JJ-2426-SM-D4P4A 60-69 years, female 153.6
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 153.3
GTEX-15CHQ-2626-SM-686YZ 60-69 years, male 149.8
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Colon - Transverse
Average nTPM: 45.0
Samples: 406

Max nTPM: 200.8
Min nTPM: 5.8
Std nTPM: 33.6
Median nTPM: 34.9
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 200.8
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 195.2
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 159.7
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 158.3
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 153.7
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 142.4
GTEX-14DAQ-2726-SM-5S2QY 60-69 years, female 133.6
GTEX-1PPGY-2826-SM-DTX9H 60-69 years, male 131.0
GTEX-11GSP-1626-SM-5986N 60-69 years, female 130.9
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 124.0
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 121.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 26.3
FF:10014-101C5 62,83,84 years, mixed 26.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.