HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.2 nTPM
HPA:41.2 nTPM
GTEx:46.5 nTPM
FANTOM5:97.9 Scaled Tags Per Million
Pig:99.8 nTPM
Mouse:115.9 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045611
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.2
Sample id Sample description nTPM
Hippocampus
nTPM: 40.3
1898 Male, age 80, left hemisphere 45.9
1855 Male, age 76, left hemisphere 43.9
1911 Female, age 85, right hemisphere 40.5
2529 Female, age 94, left hemisphere 37.8
2621 Female, age 67, right hemisphere 37.4
2148 Female, age 91, left hemisphere 36.5
Dentate gyrus
nTPM: 37.7
2528 Male, age 74, both hemispheres 40.8
2010 Male, age 76, both hemispheres 39.7
2246 Female, age 85, both hemispheres 39.0
1927 Female, age 91, both hemispheres 38.3
2530 Female, age 94, left hemisphere 36.8
2531 Female, age 67, both hemispheres 31.5
Entorhinal gyrus
nTPM: 36.9
1938 Female, age 85, left hemisphere 41.4
2117 Female, age 91, right hemisphere 41.0
1787 Male, age 76, left hemisphere 37.3
2764 Male, age 80, right hemisphere 34.8
2613 Female, age 94, left hemisphere 33.4
2686 Male, age 75, right hemisphere 33.3
Hippocampus, CA1
nTPM: 41.2
2749 Male, age 80, left hemisphere 47.4
1873 Female, age 85, both hemispheres 44.2
2045 Male, age 76, both hemispheres 39.8
2527 Male, age 74, both hemispheres 38.5
2082 Female, age 91, right hemisphere 36.0
Hippocampus, CA2
nTPM: 39.8
1892 Male, age 76, both hemispheres 42.8
1963 Male, age 80, left hemisphere 41.5
2249 Male, age 74, both hemispheres 40.8
1940 Female, age 85, left hemisphere 39.9
2113 Female, age 91, right hemisphere 38.5
2437 Female, age 94, left hemisphere 35.1
Hippocampus, CA3
nTPM: 38.1
2137 Male, age 80, left hemisphere 47.3
1867 Male, age 76, both hemispheres 41.7
1891 Female, age 85, both hemispheres 41.7
2436 Male, age 74, both hemispheres 35.3
2620 Female, age 94, left hemisphere 32.1
2861 Female, age 67, both hemispheres 30.4
Parahippocampal cortex
nTPM: 38.4
1850 Male, age 80, both hemispheres 44.0
2250 Female, age 67, right hemisphere 41.7
1933 Female, age 85, both hemispheres 40.7
2693 Female, age 94, both hemispheres 40.6
1990 Female, age 91, right hemisphere 38.0
2692 Male, age 74, both hemispheres 37.8
2532 Female, age 72, left hemisphere 36.4
2018 Male, age 76, both hemispheres 36.1
2245 Female, age 91, both hemispheres 35.9
2622 Female, age 67, right hemisphere 32.7
Perirhinal gyrus
nTPM: 40.6
1841 Female, age 85, right hemisphere 43.5
1794 Male, age 80, right hemisphere 40.6
2521 Female, age 94, right hemisphere 40.6
2848 Male, age 76, right hemisphere 39.3
1847 Female, age 91, left hemisphere 38.9
Subiculum
nTPM: 39.7
1901 Male, age 80, both hemispheres 43.4
2042 Male, age 76, both hemispheres 41.9
1977 Female, age 85, both hemispheres 40.5
2729 Female, age 91, right hemisphere 39.1
2619 Male, age 74, both hemispheres 37.2
2438 Female, age 94, left hemisphere 36.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.5
Samples: 197

Max nTPM: 73.5
Min nTPM: 28.5
Std nTPM: 7.5
Median nTPM: 45.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 73.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 71.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 68.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 65.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 64.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 64.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 62.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 61.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 61.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 60.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 60.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.9
FF:10169-103B7 60 years, female 104.6
FF:10153-102I9 76 years, female 91.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 99.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 99.8
Samples: 4

Max nTPM: 120.5
Min nTPM: 84.1
Sample A Female 120.5
Sample B Female 99.0
Sample C Male 95.7
Sample D Male 84.1
Entorhinal cortex
nTPM: 81.9
Samples: 4

Max nTPM: 86.8
Min nTPM: 76.3
Sample A Female 81.9
Sample B Female 82.5
Sample C Male 86.8
Sample D Male 76.3
Subiculum
nTPM: 89.2
Samples: 4

Max nTPM: 102.7
Min nTPM: 82.6
Sample A Female 102.7
Sample B Female 86.6
Sample C Male 82.6
Sample D Male 84.7
Ventral hippocampus
nTPM: 89.4
Samples: 4

Max nTPM: 97.9
Min nTPM: 75.6
Sample A Female 93.5
Sample B Female 75.6
Sample C Male 90.6
Sample D Male 97.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 115.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.8
Samples: 4

Max nTPM: 103.6
Min nTPM: 91.0
Sample A Male 93.4
Sample B Male 91.0
Sample C Female 95.2
Sample D Female 103.6
Hippocampal formation
nTPM: 115.8
Samples: 4

Max nTPM: 137.7
Min nTPM: 100.2
Sample A Male 103.5
Sample B Male 121.9
Sample C Female 137.7
Sample D Female 100.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
69817799 Antisense, RP_050510_03_G09, Mouse strain C57BL/6J (56 days, male) 5.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.