HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:84.1 nTPM
HPA:84.1 nTPM
GTEx:68.8 nTPM
FANTOM5:40.2 Scaled Tags Per Million
Pig:34.3 nTPM
Mouse:79.5 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026425Antibody HPA052751Antibody CAB027391Antibody CAB047353
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detectedNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.1
Sample id Sample description nTPM
Hippocampus
nTPM: 80.8
1898 Male, age 80, left hemisphere 89.7
1855 Male, age 76, left hemisphere 82.6
2148 Female, age 91, left hemisphere 79.7
2621 Female, age 67, right hemisphere 79.7
1911 Female, age 85, right hemisphere 77.7
2529 Female, age 94, left hemisphere 75.2
Dentate gyrus
nTPM: 80.9
1927 Female, age 91, both hemispheres 85.6
2530 Female, age 94, left hemisphere 84.1
2010 Male, age 76, both hemispheres 83.4
2528 Male, age 74, both hemispheres 80.4
2246 Female, age 85, both hemispheres 76.3
2531 Female, age 67, both hemispheres 75.7
Entorhinal gyrus
nTPM: 80.1
2117 Female, age 91, right hemisphere 83.0
1938 Female, age 85, left hemisphere 82.2
1787 Male, age 76, left hemisphere 81.4
2764 Male, age 80, right hemisphere 81.2
2613 Female, age 94, left hemisphere 80.9
2686 Male, age 75, right hemisphere 72.1
Hippocampus, CA1
nTPM: 84.1
2749 Male, age 80, left hemisphere 92.7
2045 Male, age 76, both hemispheres 85.0
1873 Female, age 85, both hemispheres 82.7
2082 Female, age 91, right hemisphere 80.4
2527 Male, age 74, both hemispheres 79.8
Hippocampus, CA2
nTPM: 82.5
1892 Male, age 76, both hemispheres 88.3
1963 Male, age 80, left hemisphere 86.1
2249 Male, age 74, both hemispheres 83.1
1940 Female, age 85, left hemisphere 80.9
2113 Female, age 91, right hemisphere 78.4
2437 Female, age 94, left hemisphere 78.3
Hippocampus, CA3
nTPM: 81.2
1867 Male, age 76, both hemispheres 86.0
2137 Male, age 80, left hemisphere 83.1
2620 Female, age 94, left hemisphere 81.2
1891 Female, age 85, both hemispheres 80.5
2436 Male, age 74, both hemispheres 79.7
2861 Female, age 67, both hemispheres 76.9
Parahippocampal cortex
nTPM: 78.2
1850 Male, age 80, both hemispheres 83.0
1990 Female, age 91, right hemisphere 80.3
2250 Female, age 67, right hemisphere 79.9
1933 Female, age 85, both hemispheres 79.8
2018 Male, age 76, both hemispheres 79.5
2693 Female, age 94, both hemispheres 77.5
2692 Male, age 74, both hemispheres 77.4
2245 Female, age 91, both hemispheres 77.2
2532 Female, age 72, left hemisphere 74.3
2622 Female, age 67, right hemisphere 72.8
Perirhinal gyrus
nTPM: 82.2
1847 Female, age 91, left hemisphere 90.1
1794 Male, age 80, right hemisphere 84.0
1841 Female, age 85, right hemisphere 81.2
2521 Female, age 94, right hemisphere 80.4
2848 Male, age 76, right hemisphere 75.6
Subiculum
nTPM: 80.9
1901 Male, age 80, both hemispheres 83.1
1977 Female, age 85, both hemispheres 82.3
2042 Male, age 76, both hemispheres 81.3
2729 Female, age 91, right hemisphere 80.5
2438 Female, age 94, left hemisphere 79.4
2619 Male, age 74, both hemispheres 78.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.8
Samples: 197

Max nTPM: 113.5
Min nTPM: 37.9
Std nTPM: 11.9
Median nTPM: 68.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 113.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 106.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 98.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 95.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 94.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 94.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 91.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 91.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 91.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 90.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 90.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.2
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 39.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.8
Samples: 4

Max nTPM: 46.8
Min nTPM: 24.9
Sample A Female 46.8
Sample B Female 30.1
Sample C Male 29.3
Sample D Male 24.9
Entorhinal cortex
nTPM: 29.4
Samples: 4

Max nTPM: 32.4
Min nTPM: 23.4
Sample A Female 31.7
Sample B Female 32.4
Sample C Male 29.9
Sample D Male 23.4
Subiculum
nTPM: 29.6
Samples: 4

Max nTPM: 37.6
Min nTPM: 24.1
Sample A Female 37.6
Sample B Female 28.8
Sample C Male 27.7
Sample D Male 24.1
Ventral hippocampus
nTPM: 34.3
Samples: 4

Max nTPM: 39.3
Min nTPM: 24.6
Sample A Female 37.0
Sample B Female 24.6
Sample C Male 39.3
Sample D Male 36.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.6
Samples: 4

Max nTPM: 82.7
Min nTPM: 73.0
Sample A Male 73.0
Sample B Male 82.7
Sample C Female 80.3
Sample D Female 82.2
Hippocampal formation
nTPM: 68.3
Samples: 4

Max nTPM: 83.0
Min nTPM: 57.7
Sample A Male 83.0
Sample B Male 57.7
Sample C Female 62.7
Sample D Female 69.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
73834104 Antisense, RP_050725_02_F02, Mouse strain C57BL/6J (56 days, male) 4.0
70813922 Antisense, RP_050725_02_F02, Mouse strain C57BL/6J (56 days, male) 4.0

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The Human Protein Atlas

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