COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:127.9 nTPM
HPA:69.9 nTPM
GTEx:127.9 nTPM
FANTOM5:116.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA035873Antibody HPA035874Antibody CAB009794
Endothelial cells MediumMediumMedium
Glandular cells MediumLowMedium
Peripheral nerve/ganglion MediumMedium-







COLON - HPA RNA-seqi
Average nTPM 69.9
overview
Male, age 54 		Colon sample 67
nTPM: 56.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 65.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 62.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 72.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 62.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 82.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 72.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 64.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 82.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 67.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 73.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 77.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 68.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 127.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 127.9
Samples: 373

Max nTPM: 185.8
Min nTPM: 64.9
Std nTPM: 24.5
Median nTPM: 128.9
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 185.8
GTEX-14E1K-1626-SM-664MO 50-59 years, male 185.2
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 182.5
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 179.0
GTEX-1S5ZA-1426-SM-E6CJQ 20-29 years, male 177.2
GTEX-14PK6-1826-SM-69LOM 70-79 years, female 176.5
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 175.9
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 175.1
GTEX-1N2DV-1826-SM-E6CJ5 40-49 years, male 174.2
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 173.9
GTEX-1LG7Z-1326-SM-DIPF3 30-39 years, male 173.1
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Colon - Transverse
Average nTPM: 98.3
Samples: 406

Max nTPM: 180.8
Min nTPM: 57.5
Std nTPM: 24.0
Median nTPM: 92.8
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 180.8
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 170.8
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 169.0
GTEX-14E1K-1826-SM-793DT 50-59 years, male 163.3
GTEX-14PJ3-0926-SM-69LQG 50-59 years, male 162.9
GTEX-17F96-2026-SM-79ON4 70-79 years, male 160.4
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 159.2
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 156.8
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 156.3
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 152.6
GTEX-1C64O-2326-SM-73KU8 60-69 years, male 152.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 116.3
FF:10014-101C5 62,83,84 years, mixed 116.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.