HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.1 nTPM
HPA:14.1 nTPM
GTEx:13.2 nTPM
FANTOM5:81.0 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:18.2 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035400
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.1
Sample id Sample description nTPM
Hippocampus
nTPM: 13.5
1898 Male, age 80, left hemisphere 14.5
2529 Female, age 94, left hemisphere 13.9
1911 Female, age 85, right hemisphere 13.7
1855 Male, age 76, left hemisphere 13.1
2621 Female, age 67, right hemisphere 13.1
2148 Female, age 91, left hemisphere 12.9
Dentate gyrus
nTPM: 13.6
2530 Female, age 94, left hemisphere 14.0
2010 Male, age 76, both hemispheres 13.9
2528 Male, age 74, both hemispheres 13.8
2246 Female, age 85, both hemispheres 13.5
1927 Female, age 91, both hemispheres 13.4
2531 Female, age 67, both hemispheres 12.7
Entorhinal gyrus
nTPM: 13.9
2117 Female, age 91, right hemisphere 14.8
1938 Female, age 85, left hemisphere 14.4
1787 Male, age 76, left hemisphere 14.0
2764 Male, age 80, right hemisphere 13.8
2613 Female, age 94, left hemisphere 13.3
2686 Male, age 75, right hemisphere 13.1
Hippocampus, CA1
nTPM: 13.7
1873 Female, age 85, both hemispheres 14.3
2527 Male, age 74, both hemispheres 14.3
2749 Male, age 80, left hemisphere 13.7
2082 Female, age 91, right hemisphere 13.3
2045 Male, age 76, both hemispheres 13.2
Hippocampus, CA2
nTPM: 14.0
1963 Male, age 80, left hemisphere 14.4
1892 Male, age 76, both hemispheres 14.3
2249 Male, age 74, both hemispheres 14.2
2437 Female, age 94, left hemisphere 13.9
1940 Female, age 85, left hemisphere 13.7
2113 Female, age 91, right hemisphere 13.7
Hippocampus, CA3
nTPM: 13.6
1891 Female, age 85, both hemispheres 15.0
1867 Male, age 76, both hemispheres 14.5
2436 Male, age 74, both hemispheres 13.6
2137 Male, age 80, left hemisphere 13.2
2620 Female, age 94, left hemisphere 12.9
2861 Female, age 67, both hemispheres 12.7
Parahippocampal cortex
nTPM: 13.5
1990 Female, age 91, right hemisphere 14.2
1850 Male, age 80, both hemispheres 14.1
1933 Female, age 85, both hemispheres 14.1
2018 Male, age 76, both hemispheres 14.1
2250 Female, age 67, right hemisphere 13.8
2532 Female, age 72, left hemisphere 13.5
2692 Male, age 74, both hemispheres 13.3
2693 Female, age 94, both hemispheres 13.3
2245 Female, age 91, both hemispheres 13.1
2622 Female, age 67, right hemisphere 11.7
Perirhinal gyrus
nTPM: 13.8
1841 Female, age 85, right hemisphere 14.4
1847 Female, age 91, left hemisphere 14.1
1794 Male, age 80, right hemisphere 13.9
2848 Male, age 76, right hemisphere 13.4
2521 Female, age 94, right hemisphere 13.2
Subiculum
nTPM: 14.1
1977 Female, age 85, both hemispheres 15.2
1901 Male, age 80, both hemispheres 14.5
2042 Male, age 76, both hemispheres 14.3
2438 Female, age 94, left hemisphere 14.1
2729 Female, age 91, right hemisphere 13.5
2619 Male, age 74, both hemispheres 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 26.8
Min nTPM: 7.7
Std nTPM: 2.8
Median nTPM: 12.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 26.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 23.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 19.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 19.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 19.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 18.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 18.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 18.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 18.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 18.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.0
FF:10169-103B7 60 years, female 91.0
FF:10153-102I9 76 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.3
Sample A Female 18.2
Sample B Female 16.5
Sample C Male 16.4
Sample D Male 13.3
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 16.3
Min nTPM: 13.1
Sample A Female 16.1
Sample B Female 16.3
Sample C Male 16.0
Sample D Male 13.1
Subiculum
nTPM: 16.1
Samples: 4

Max nTPM: 19.8
Min nTPM: 14.1
Sample A Female 19.8
Sample B Female 15.2
Sample C Male 15.2
Sample D Male 14.1
Ventral hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 16.7
Min nTPM: 13.2
Sample A Female 16.7
Sample B Female 13.2
Sample C Male 14.2
Sample D Male 14.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 16.9
Min nTPM: 16.6
Sample A Male 16.6
Sample B Male 16.7
Sample C Female 16.9
Sample D Female 16.6
Hippocampal formation
nTPM: 18.2
Samples: 4

Max nTPM: 19.3
Min nTPM: 17.4
Sample A Male 19.3
Sample B Male 18.3
Sample C Female 17.9
Sample D Female 17.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
69261418 Antisense, RP_050118_03_D10, Mouse strain C57BL/6J (56 days, male) 3.3

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