HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.0 nTPM
HPA:33.0 nTPM
GTEx:40.6 nTPM
FANTOM5:57.2 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:108.6 nTPM
Allen mouse:14.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039457
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.0
Sample id Sample description nTPM
Hippocampus
nTPM: 30.2
1855 Male, age 76, left hemisphere 34.1
1898 Male, age 80, left hemisphere 33.6
1911 Female, age 85, right hemisphere 29.2
2621 Female, age 67, right hemisphere 28.6
2148 Female, age 91, left hemisphere 27.9
2529 Female, age 94, left hemisphere 27.6
Dentate gyrus
nTPM: 31.2
2010 Male, age 76, both hemispheres 33.5
2530 Female, age 94, left hemisphere 33.1
2528 Male, age 74, both hemispheres 32.1
1927 Female, age 91, both hemispheres 30.4
2246 Female, age 85, both hemispheres 30.1
2531 Female, age 67, both hemispheres 28.2
Entorhinal gyrus
nTPM: 32.9
2764 Male, age 80, right hemisphere 35.7
1938 Female, age 85, left hemisphere 34.3
2613 Female, age 94, left hemisphere 33.8
1787 Male, age 76, left hemisphere 33.2
2117 Female, age 91, right hemisphere 33.1
2686 Male, age 75, right hemisphere 27.3
Hippocampus, CA1
nTPM: 32.1
2749 Male, age 80, left hemisphere 40.5
2045 Male, age 76, both hemispheres 31.4
1873 Female, age 85, both hemispheres 30.6
2527 Male, age 74, both hemispheres 30.3
2082 Female, age 91, right hemisphere 27.6
Hippocampus, CA2
nTPM: 31.9
1892 Male, age 76, both hemispheres 36.9
1963 Male, age 80, left hemisphere 36.7
2249 Male, age 74, both hemispheres 32.6
2437 Female, age 94, left hemisphere 29.2
2113 Female, age 91, right hemisphere 28.6
1940 Female, age 85, left hemisphere 27.4
Hippocampus, CA3
nTPM: 31.3
1867 Male, age 76, both hemispheres 36.3
2137 Male, age 80, left hemisphere 35.4
2436 Male, age 74, both hemispheres 31.4
1891 Female, age 85, both hemispheres 30.9
2620 Female, age 94, left hemisphere 30.6
2861 Female, age 67, both hemispheres 23.2
Parahippocampal cortex
nTPM: 29.7
1850 Male, age 80, both hemispheres 34.2
2018 Male, age 76, both hemispheres 32.6
1990 Female, age 91, right hemisphere 32.1
1933 Female, age 85, both hemispheres 31.7
2532 Female, age 72, left hemisphere 30.7
2245 Female, age 91, both hemispheres 29.5
2250 Female, age 67, right hemisphere 28.0
2693 Female, age 94, both hemispheres 27.8
2692 Male, age 74, both hemispheres 26.7
2622 Female, age 67, right hemisphere 24.1
Perirhinal gyrus
nTPM: 33.0
1794 Male, age 80, right hemisphere 35.3
1847 Female, age 91, left hemisphere 33.6
1841 Female, age 85, right hemisphere 33.3
2848 Male, age 76, right hemisphere 31.7
2521 Female, age 94, right hemisphere 30.9
Subiculum
nTPM: 30.7
1977 Female, age 85, both hemispheres 34.8
1901 Male, age 80, both hemispheres 33.2
2042 Male, age 76, both hemispheres 32.5
2619 Male, age 74, both hemispheres 28.3
2438 Female, age 94, left hemisphere 27.9
2729 Female, age 91, right hemisphere 27.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.6
Samples: 197

Max nTPM: 85.6
Min nTPM: 13.2
Std nTPM: 12.0
Median nTPM: 40.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 85.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 70.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 70.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 68.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 66.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 63.8
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 63.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 61.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 60.8
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 60.6
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 60.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.2
FF:10153-102I9 76 years, female 62.2
FF:10169-103B7 60 years, female 52.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 17.8
Min nTPM: 10.9
Sample A Female 17.8
Sample B Female 14.8
Sample C Male 10.9
Sample D Male 12.1
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 12.2
Min nTPM: 8.0
Sample A Female 12.2
Sample B Female 11.4
Sample C Male 9.3
Sample D Male 8.0
Subiculum
nTPM: 10.6
Samples: 4

Max nTPM: 12.6
Min nTPM: 9.7
Sample A Female 12.6
Sample B Female 10.1
Sample C Male 9.7
Sample D Male 10.0
Ventral hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.2
Sample A Female 14.4
Sample B Female 10.2
Sample C Male 11.6
Sample D Male 12.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 108.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 108.7
Samples: 4

Max nTPM: 115.0
Min nTPM: 104.1
Sample A Male 104.1
Sample B Male 105.9
Sample C Female 109.6
Sample D Female 115.0
Hippocampal formation
nTPM: 100.5
Samples: 4

Max nTPM: 107.1
Min nTPM: 94.4
Sample A Male 107.1
Sample B Male 94.4
Sample C Female 98.2
Sample D Female 102.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.2
69838210 Antisense, RP_050224_02_D04, Mouse strain C57BL/6J (56 days, male) 14.2

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