HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.8 nTPM
HPA:16.8 nTPM
GTEx:28.8 nTPM
FANTOM5:40.0 Scaled Tags Per Million
Pig:76.6 nTPM
Mouse:154.2 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002475
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.8
Sample id Sample description nTPM
Hippocampus
nTPM: 0.0
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 1.3
1927 Female, age 91, both hemispheres 6.4
2531 Female, age 67, both hemispheres 1.5
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 16.8
2613 Female, age 94, left hemisphere 58.9
1938 Female, age 85, left hemisphere 22.4
1787 Male, age 76, left hemisphere 11.7
2764 Male, age 80, right hemisphere 8.3
2117 Female, age 91, right hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.0
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 0.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 0.6
2620 Female, age 94, left hemisphere 3.6
1867 Male, age 76, both hemispheres 0.1
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 11.8
1990 Female, age 91, right hemisphere 32.2
2532 Female, age 72, left hemisphere 22.7
2622 Female, age 67, right hemisphere 22.2
2692 Male, age 74, both hemispheres 18.4
1850 Male, age 80, both hemispheres 15.8
2250 Female, age 67, right hemisphere 2.9
2693 Female, age 94, both hemispheres 2.8
2245 Female, age 91, both hemispheres 1.5
1933 Female, age 85, both hemispheres 0.0
2018 Male, age 76, both hemispheres 0.0
Perirhinal gyrus
nTPM: 8.7
1847 Female, age 91, left hemisphere 27.4
1794 Male, age 80, right hemisphere 7.0
1841 Female, age 85, right hemisphere 7.0
2521 Female, age 94, right hemisphere 2.2
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 3.4
1977 Female, age 85, both hemispheres 9.4
2619 Male, age 74, both hemispheres 7.2
2438 Female, age 94, left hemisphere 4.1
1901 Male, age 80, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.8
Samples: 197

Max nTPM: 172.7
Min nTPM: 2.1
Std nTPM: 27.4
Median nTPM: 19.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 172.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 171.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 121.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 108.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 108.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 107.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 100.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 95.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 95.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 94.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 94.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.0
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 38.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.2
Samples: 4

Max nTPM: 59.9
Min nTPM: 26.6
Sample A Female 29.5
Sample B Female 44.6
Sample C Male 59.9
Sample D Male 26.6
Entorhinal cortex
nTPM: 76.7
Samples: 4

Max nTPM: 79.6
Min nTPM: 71.6
Sample A Female 77.1
Sample B Female 79.6
Sample C Male 71.6
Sample D Male 78.3
Subiculum
nTPM: 52.9
Samples: 4

Max nTPM: 63.4
Min nTPM: 47.4
Sample A Female 63.4
Sample B Female 48.3
Sample C Male 52.6
Sample D Male 47.4
Ventral hippocampus
nTPM: 34.5
Samples: 4

Max nTPM: 48.8
Min nTPM: 18.7
Sample A Female 18.7
Sample B Female 33.7
Sample C Male 48.8
Sample D Male 36.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 154.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 154.2
Samples: 4

Max nTPM: 176.5
Min nTPM: 139.4
Sample A Male 176.5
Sample B Male 159.0
Sample C Female 142.0
Sample D Female 139.4
Hippocampal formation
nTPM: 142.4
Samples: 4

Max nTPM: 152.9
Min nTPM: 129.9
Sample A Male 129.9
Sample B Male 152.1
Sample C Female 152.9
Sample D Female 134.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
71587899 Antisense, RP_050725_03_G03, Mouse strain C57BL/6J (56 days, male) 14.0
68845556 Antisense, RP_050224_02_A07, Mouse strain C57BL/6J (56 days, male) 13.4

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The Human Protein Atlas

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