HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.6 nTPM
HPA:26.6 nTPM
GTEx:115.4 nTPM
FANTOM5:275.8 Scaled Tags Per Million
Pig:117.1 nTPM
Mouse:232.2 nTPM
Allen mouse:23.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049352
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.6
Sample id Sample description nTPM
Hippocampus
nTPM: 23.6
2621 Female, age 67, right hemisphere 29.4
1898 Male, age 80, left hemisphere 28.2
1855 Male, age 76, left hemisphere 24.5
2148 Female, age 91, left hemisphere 23.1
2529 Female, age 94, left hemisphere 20.3
1911 Female, age 85, right hemisphere 16.3
Dentate gyrus
nTPM: 22.1
2528 Male, age 74, both hemispheres 28.1
2531 Female, age 67, both hemispheres 23.2
1927 Female, age 91, both hemispheres 23.1
2246 Female, age 85, both hemispheres 21.7
2530 Female, age 94, left hemisphere 20.7
2010 Male, age 76, both hemispheres 15.7
Entorhinal gyrus
nTPM: 23.2
2764 Male, age 80, right hemisphere 32.2
2613 Female, age 94, left hemisphere 28.1
2686 Male, age 75, right hemisphere 21.7
1938 Female, age 85, left hemisphere 20.0
2117 Female, age 91, right hemisphere 18.7
1787 Male, age 76, left hemisphere 18.2
Hippocampus, CA1
nTPM: 24.1
2749 Male, age 80, left hemisphere 32.5
2527 Male, age 74, both hemispheres 26.9
2045 Male, age 76, both hemispheres 23.6
1873 Female, age 85, both hemispheres 23.4
2082 Female, age 91, right hemisphere 14.3
Hippocampus, CA2
nTPM: 18.0
2437 Female, age 94, left hemisphere 21.4
1892 Male, age 76, both hemispheres 18.5
2249 Male, age 74, both hemispheres 18.2
1940 Female, age 85, left hemisphere 17.7
1963 Male, age 80, left hemisphere 16.5
2113 Female, age 91, right hemisphere 15.7
Hippocampus, CA3
nTPM: 25.6
2620 Female, age 94, left hemisphere 52.3
2861 Female, age 67, both hemispheres 32.7
2137 Male, age 80, left hemisphere 24.3
1867 Male, age 76, both hemispheres 17.0
2436 Male, age 74, both hemispheres 15.4
1891 Female, age 85, both hemispheres 11.9
Parahippocampal cortex
nTPM: 23.8
2622 Female, age 67, right hemisphere 31.8
2245 Female, age 91, both hemispheres 30.6
2532 Female, age 72, left hemisphere 29.4
1850 Male, age 80, both hemispheres 26.7
1990 Female, age 91, right hemisphere 23.5
2692 Male, age 74, both hemispheres 22.8
2693 Female, age 94, both hemispheres 22.0
1933 Female, age 85, both hemispheres 21.1
2250 Female, age 67, right hemisphere 15.4
2018 Male, age 76, both hemispheres 14.5
Perirhinal gyrus
nTPM: 26.6
1794 Male, age 80, right hemisphere 34.5
1847 Female, age 91, left hemisphere 27.7
2521 Female, age 94, right hemisphere 25.4
2848 Male, age 76, right hemisphere 23.1
1841 Female, age 85, right hemisphere 22.5
Subiculum
nTPM: 19.6
2619 Male, age 74, both hemispheres 32.4
2438 Female, age 94, left hemisphere 22.9
2729 Female, age 91, right hemisphere 17.7
2042 Male, age 76, both hemispheres 15.9
1901 Male, age 80, both hemispheres 15.5
1977 Female, age 85, both hemispheres 13.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 115.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 115.4
Samples: 197

Max nTPM: 204.4
Min nTPM: 41.0
Std nTPM: 36.6
Median nTPM: 111.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 204.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 197.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 195.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 193.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 193.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 193.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 186.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 186.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 185.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 183.2
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 182.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 275.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 275.8
FF:10169-103B7 60 years, female 350.5
FF:10153-102I9 76 years, female 201.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 117.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 117.0
Samples: 4

Max nTPM: 155.2
Min nTPM: 94.1
Sample A Female 155.2
Sample B Female 123.7
Sample C Male 95.1
Sample D Male 94.1
Entorhinal cortex
nTPM: 96.7
Samples: 4

Max nTPM: 106.8
Min nTPM: 87.1
Sample A Female 106.8
Sample B Female 93.2
Sample C Male 99.8
Sample D Male 87.1
Subiculum
nTPM: 93.2
Samples: 4

Max nTPM: 125.4
Min nTPM: 74.3
Sample A Female 125.4
Sample B Female 84.0
Sample C Male 89.2
Sample D Male 74.3
Ventral hippocampus
nTPM: 111.4
Samples: 4

Max nTPM: 139.3
Min nTPM: 73.9
Sample A Female 103.6
Sample B Female 73.9
Sample C Male 128.7
Sample D Male 139.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 232.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 198.7
Samples: 4

Max nTPM: 209.8
Min nTPM: 188.1
Sample A Male 188.8
Sample B Male 188.1
Sample C Female 209.8
Sample D Female 208.0
Hippocampal formation
nTPM: 232.2
Samples: 4

Max nTPM: 244.2
Min nTPM: 214.1
Sample A Male 238.4
Sample B Male 232.1
Sample C Female 244.2
Sample D Female 214.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.4
413811 Antisense, RP_040809_01_F07, Mouse strain C57BL/6J (56 days, male) 23.4

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