HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.5 nTPM
HPA:12.5 nTPM
GTEx:11.3 nTPM
FANTOM5:15.3 Scaled Tags Per Million
Pig:8.0 nTPM
Mouse:29.5 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039593
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.7
1855 Male, age 76, left hemisphere 12.2
1898 Male, age 80, left hemisphere 12.2
2148 Female, age 91, left hemisphere 12.0
1911 Female, age 85, right hemisphere 11.6
2529 Female, age 94, left hemisphere 11.2
2621 Female, age 67, right hemisphere 10.9
Dentate gyrus
nTPM: 11.5
1927 Female, age 91, both hemispheres 12.3
2528 Male, age 74, both hemispheres 12.0
2010 Male, age 76, both hemispheres 11.8
2246 Female, age 85, both hemispheres 11.6
2531 Female, age 67, both hemispheres 11.4
2530 Female, age 94, left hemisphere 9.9
Entorhinal gyrus
nTPM: 11.6
1938 Female, age 85, left hemisphere 12.5
2117 Female, age 91, right hemisphere 11.9
1787 Male, age 76, left hemisphere 11.6
2764 Male, age 80, right hemisphere 11.5
2686 Male, age 75, right hemisphere 11.2
2613 Female, age 94, left hemisphere 10.9
Hippocampus, CA1
nTPM: 12.4
1873 Female, age 85, both hemispheres 13.3
2749 Male, age 80, left hemisphere 13.2
2527 Male, age 74, both hemispheres 12.0
2045 Male, age 76, both hemispheres 11.8
2082 Female, age 91, right hemisphere 11.8
Hippocampus, CA2
nTPM: 11.7
1963 Male, age 80, left hemisphere 12.6
2113 Female, age 91, right hemisphere 12.3
1892 Male, age 76, both hemispheres 11.8
2249 Male, age 74, both hemispheres 11.6
1940 Female, age 85, left hemisphere 11.3
2437 Female, age 94, left hemisphere 10.8
Hippocampus, CA3
nTPM: 11.7
2137 Male, age 80, left hemisphere 13.0
2620 Female, age 94, left hemisphere 12.5
1891 Female, age 85, both hemispheres 12.3
1867 Male, age 76, both hemispheres 11.2
2861 Female, age 67, both hemispheres 11.0
2436 Male, age 74, both hemispheres 10.5
Parahippocampal cortex
nTPM: 12.1
2693 Female, age 94, both hemispheres 14.5
2250 Female, age 67, right hemisphere 12.5
2532 Female, age 72, left hemisphere 12.5
1850 Male, age 80, both hemispheres 12.3
1990 Female, age 91, right hemisphere 12.1
1933 Female, age 85, both hemispheres 12.0
2692 Male, age 74, both hemispheres 11.8
2245 Female, age 91, both hemispheres 11.5
2018 Male, age 76, both hemispheres 11.4
2622 Female, age 67, right hemisphere 10.8
Perirhinal gyrus
nTPM: 12.5
1841 Female, age 85, right hemisphere 13.3
2848 Male, age 76, right hemisphere 12.7
1847 Female, age 91, left hemisphere 12.3
1794 Male, age 80, right hemisphere 12.2
2521 Female, age 94, right hemisphere 12.2
Subiculum
nTPM: 11.2
2729 Female, age 91, right hemisphere 12.4
1977 Female, age 85, both hemispheres 12.3
1901 Male, age 80, both hemispheres 11.4
2619 Male, age 74, both hemispheres 11.1
2042 Male, age 76, both hemispheres 10.6
2438 Female, age 94, left hemisphere 9.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.3
Samples: 197

Max nTPM: 23.0
Min nTPM: 5.5
Std nTPM: 2.3
Median nTPM: 10.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 23.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 20.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 19.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 18.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 17.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 17.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 16.6
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 16.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 16.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 15.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 15.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.3
FF:10153-102I9 76 years, female 16.0
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.0
Sample A Female 9.2
Sample B Female 8.3
Sample C Male 7.5
Sample D Male 7.0
Entorhinal cortex
nTPM: 6.6
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.8
Sample A Female 7.0
Sample B Female 7.3
Sample C Male 6.2
Sample D Male 5.8
Subiculum
nTPM: 6.9
Samples: 4

Max nTPM: 7.9
Min nTPM: 5.8
Sample A Female 7.9
Sample B Female 7.1
Sample C Male 6.8
Sample D Male 5.8
Ventral hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 7.8
Min nTPM: 7.1
Sample A Female 7.8
Sample B Female 7.1
Sample C Male 7.5
Sample D Male 7.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.1
Samples: 4

Max nTPM: 29.3
Min nTPM: 24.7
Sample A Male 25.4
Sample B Male 29.3
Sample C Female 28.8
Sample D Female 24.7
Hippocampal formation
nTPM: 29.5
Samples: 4

Max nTPM: 31.4
Min nTPM: 27.5
Sample A Male 31.4
Sample B Male 29.0
Sample C Female 27.5
Sample D Female 30.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
69261958 Antisense, RP_050224_01_A05, Mouse strain C57BL/6J (56 days, male) 4.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.