HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.2 nTPM
HPA:39.2 nTPM
GTEx:32.5 nTPM
FANTOM5:33.4 Scaled Tags Per Million
Pig:51.1 nTPM
Mouse:97.1 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035450Antibody HPA035451
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.2
Sample id Sample description nTPM
Hippocampus
nTPM: 36.8
1898 Male, age 80, left hemisphere 37.6
1855 Male, age 76, left hemisphere 37.2
2529 Female, age 94, left hemisphere 36.8
2621 Female, age 67, right hemisphere 36.8
2148 Female, age 91, left hemisphere 36.6
1911 Female, age 85, right hemisphere 35.9
Dentate gyrus
nTPM: 35.6
2010 Male, age 76, both hemispheres 36.8
2530 Female, age 94, left hemisphere 36.4
1927 Female, age 91, both hemispheres 35.6
2531 Female, age 67, both hemispheres 35.6
2246 Female, age 85, both hemispheres 35.2
2528 Male, age 74, both hemispheres 34.2
Entorhinal gyrus
nTPM: 36.9
2764 Male, age 80, right hemisphere 39.2
1938 Female, age 85, left hemisphere 37.7
2686 Male, age 75, right hemisphere 36.8
2613 Female, age 94, left hemisphere 36.4
1787 Male, age 76, left hemisphere 35.6
2117 Female, age 91, right hemisphere 35.6
Hippocampus, CA1
nTPM: 37.3
2045 Male, age 76, both hemispheres 40.1
2749 Male, age 80, left hemisphere 39.0
1873 Female, age 85, both hemispheres 37.2
2527 Male, age 74, both hemispheres 37.2
2082 Female, age 91, right hemisphere 32.8
Hippocampus, CA2
nTPM: 37.3
2249 Male, age 74, both hemispheres 40.3
2437 Female, age 94, left hemisphere 38.7
1963 Male, age 80, left hemisphere 36.9
1892 Male, age 76, both hemispheres 36.8
1940 Female, age 85, left hemisphere 35.5
2113 Female, age 91, right hemisphere 35.4
Hippocampus, CA3
nTPM: 39.2
2436 Male, age 74, both hemispheres 51.3
2137 Male, age 80, left hemisphere 38.7
2620 Female, age 94, left hemisphere 37.3
2861 Female, age 67, both hemispheres 36.3
1891 Female, age 85, both hemispheres 36.2
1867 Male, age 76, both hemispheres 35.8
Parahippocampal cortex
nTPM: 36.9
1850 Male, age 80, both hemispheres 39.5
1933 Female, age 85, both hemispheres 37.8
2018 Male, age 76, both hemispheres 37.8
2692 Male, age 74, both hemispheres 37.3
2250 Female, age 67, right hemisphere 37.1
2622 Female, age 67, right hemisphere 36.9
1990 Female, age 91, right hemisphere 36.3
2532 Female, age 72, left hemisphere 36.3
2245 Female, age 91, both hemispheres 35.2
2693 Female, age 94, both hemispheres 34.5
Perirhinal gyrus
nTPM: 37.6
1794 Male, age 80, right hemisphere 38.9
1841 Female, age 85, right hemisphere 38.6
1847 Female, age 91, left hemisphere 38.0
2521 Female, age 94, right hemisphere 36.9
2848 Male, age 76, right hemisphere 35.7
Subiculum
nTPM: 36.1
2619 Male, age 74, both hemispheres 38.0
2438 Female, age 94, left hemisphere 37.2
1977 Female, age 85, both hemispheres 36.1
1901 Male, age 80, both hemispheres 35.6
2042 Male, age 76, both hemispheres 35.5
2729 Female, age 91, right hemisphere 34.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.5
Samples: 197

Max nTPM: 68.3
Min nTPM: 16.6
Std nTPM: 6.9
Median nTPM: 32.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 68.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 61.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 52.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 48.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 47.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 46.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 44.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 44.9
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 43.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 43.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 42.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.4
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 33.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.1
Samples: 4

Max nTPM: 66.4
Min nTPM: 40.3
Sample A Female 66.4
Sample B Female 45.0
Sample C Male 52.5
Sample D Male 40.3
Entorhinal cortex
nTPM: 45.7
Samples: 4

Max nTPM: 50.4
Min nTPM: 38.3
Sample A Female 48.2
Sample B Female 50.4
Sample C Male 45.9
Sample D Male 38.3
Subiculum
nTPM: 43.7
Samples: 4

Max nTPM: 56.2
Min nTPM: 37.4
Sample A Female 56.2
Sample B Female 38.6
Sample C Male 42.4
Sample D Male 37.4
Ventral hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 59.8
Min nTPM: 33.7
Sample A Female 48.5
Sample B Female 33.7
Sample C Male 59.8
Sample D Male 49.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.0
Samples: 4

Max nTPM: 101.9
Min nTPM: 85.5
Sample A Male 92.1
Sample B Male 100.3
Sample C Female 101.9
Sample D Female 85.5
Hippocampal formation
nTPM: 97.1
Samples: 4

Max nTPM: 112.2
Min nTPM: 87.1
Sample A Male 112.2
Sample B Male 87.1
Sample C Female 95.2
Sample D Female 93.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
71662900 Antisense, RP_050927_04_F04, Mouse strain C57BL/6J (56 days, male) 2.2

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