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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:286.1 nTPM
GTEx:286.1 nTPM
FANTOM5:96.5 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045840Antibody HPA054950Antibody CAB037324
Squamous epithelial cells MediumMediumHigh







VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 286.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 286.1
Samples: 156

Max nTPM: 1549.8
Min nTPM: 0.9
Std nTPM: 280.5
Median nTPM: 211.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1549.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 984.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 969.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 897.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 847.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 843.0
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 816.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 788.3
GTEX-11I78-2026-SM-5987C 50-59 years, female 764.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 709.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 698.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 698.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 693.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 682.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 674.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 673.7
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 645.2
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 641.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 619.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 613.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 599.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 585.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 571.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 557.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 556.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 550.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 549.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 548.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 545.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 544.0
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 543.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 541.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 539.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 538.7
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 530.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 528.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 525.2
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 525.1
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 517.1
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 500.9
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 497.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 493.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 487.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 486.6
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 476.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 471.9
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 468.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 457.1
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 453.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 450.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 433.6
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 413.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 388.5
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 382.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 382.1
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 378.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 378.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 370.5
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 367.2
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 360.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 346.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 344.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 336.5
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 336.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 305.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 296.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 280.7
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 268.8
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 263.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 258.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 258.0
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 257.3
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 255.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 255.0
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 252.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 245.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 216.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 214.9
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 208.1
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 202.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 202.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 200.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 195.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 192.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 189.9
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 182.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 162.8
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 161.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 161.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 157.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 150.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 148.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 134.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 131.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 123.2
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 122.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 108.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 101.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 93.1
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 75.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 75.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 68.9
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 66.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 63.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 55.9
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 46.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 44.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 44.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 41.0
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 39.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 39.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 30.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 28.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 28.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 27.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 27.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 18.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 17.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 16.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 14.4
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 11.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 10.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 9.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 7.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 5.9
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 5.5
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 5.3
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 5.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 4.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 3.6
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 3.3
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 3.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 3.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 3.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 3.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 2.9
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 2.7
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 2.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 2.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 2.4
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 2.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 2.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 2.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 2.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 2.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 2.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1.5
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 0.9
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 96.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 96.5
FF:10204-103F6 68 years, female 96.5

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