HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:90.9 nTPM
HPA:90.9 nTPM
GTEx:76.4 nTPM
FANTOM5:38.4 Scaled Tags Per Million
Pig:22.1 nTPM
Mouse:88.1 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014063
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 90.9
Sample id Sample description nTPM
Hippocampus
nTPM: 85.5
2529 Female, age 94, left hemisphere 96.1
1898 Male, age 80, left hemisphere 88.3
2148 Female, age 91, left hemisphere 86.0
2621 Female, age 67, right hemisphere 85.9
1911 Female, age 85, right hemisphere 80.2
1855 Male, age 76, left hemisphere 76.5
Dentate gyrus
nTPM: 83.8
2530 Female, age 94, left hemisphere 94.2
2531 Female, age 67, both hemispheres 85.5
2528 Male, age 74, both hemispheres 83.6
1927 Female, age 91, both hemispheres 82.2
2246 Female, age 85, both hemispheres 80.8
2010 Male, age 76, both hemispheres 76.7
Entorhinal gyrus
nTPM: 90.9
2613 Female, age 94, left hemisphere 99.1
2764 Male, age 80, right hemisphere 90.6
2686 Male, age 75, right hemisphere 90.2
2117 Female, age 91, right hemisphere 89.9
1938 Female, age 85, left hemisphere 88.6
1787 Male, age 76, left hemisphere 86.8
Hippocampus, CA1
nTPM: 79.0
2527 Male, age 74, both hemispheres 84.2
2749 Male, age 80, left hemisphere 83.1
1873 Female, age 85, both hemispheres 78.8
2082 Female, age 91, right hemisphere 78.3
2045 Male, age 76, both hemispheres 70.4
Hippocampus, CA2
nTPM: 86.8
2437 Female, age 94, left hemisphere 96.5
1963 Male, age 80, left hemisphere 96.3
1940 Female, age 85, left hemisphere 85.8
2113 Female, age 91, right hemisphere 83.3
1892 Male, age 76, both hemispheres 81.8
2249 Male, age 74, both hemispheres 77.2
Hippocampus, CA3
nTPM: 81.7
2861 Female, age 67, both hemispheres 96.9
1867 Male, age 76, both hemispheres 81.0
2137 Male, age 80, left hemisphere 80.0
1891 Female, age 85, both hemispheres 79.4
2620 Female, age 94, left hemisphere 78.6
2436 Male, age 74, both hemispheres 74.4
Parahippocampal cortex
nTPM: 85.8
2622 Female, age 67, right hemisphere 94.0
2692 Male, age 74, both hemispheres 90.6
2245 Female, age 91, both hemispheres 87.3
1990 Female, age 91, right hemisphere 87.2
2532 Female, age 72, left hemisphere 85.8
1933 Female, age 85, both hemispheres 84.1
1850 Male, age 80, both hemispheres 83.7
2250 Female, age 67, right hemisphere 83.7
2018 Male, age 76, both hemispheres 83.0
2693 Female, age 94, both hemispheres 78.9
Perirhinal gyrus
nTPM: 85.2
1794 Male, age 80, right hemisphere 89.2
1847 Female, age 91, left hemisphere 88.0
2521 Female, age 94, right hemisphere 86.8
1841 Female, age 85, right hemisphere 84.9
2848 Male, age 76, right hemisphere 77.0
Subiculum
nTPM: 85.5
2619 Male, age 74, both hemispheres 90.8
2438 Female, age 94, left hemisphere 88.0
1901 Male, age 80, both hemispheres 86.4
1977 Female, age 85, both hemispheres 85.7
2729 Female, age 91, right hemisphere 83.4
2042 Male, age 76, both hemispheres 78.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.4
Samples: 197

Max nTPM: 182.1
Min nTPM: 28.7
Std nTPM: 24.3
Median nTPM: 74.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 182.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 158.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 157.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 151.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 140.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 137.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 136.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 133.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 132.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 125.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 123.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.4
FF:10153-102I9 76 years, female 40.3
FF:10169-103B7 60 years, female 36.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 25.0
Min nTPM: 14.6
Sample A Female 25.0
Sample B Female 17.7
Sample C Male 21.2
Sample D Male 14.6
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 29.5
Min nTPM: 16.4
Sample A Female 19.1
Sample B Female 29.5
Sample C Male 23.3
Sample D Male 16.4
Subiculum
nTPM: 15.2
Samples: 4

Max nTPM: 21.1
Min nTPM: 12.4
Sample A Female 21.1
Sample B Female 13.6
Sample C Male 13.8
Sample D Male 12.4
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 23.8
Min nTPM: 12.3
Sample A Female 19.7
Sample B Female 12.3
Sample C Male 23.8
Sample D Male 16.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 88.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 85.3
Samples: 4

Max nTPM: 88.3
Min nTPM: 81.8
Sample A Male 88.1
Sample B Male 83.0
Sample C Female 88.3
Sample D Female 81.8
Hippocampal formation
nTPM: 88.1
Samples: 4

Max nTPM: 94.0
Min nTPM: 84.9
Sample A Male 94.0
Sample B Male 84.9
Sample C Female 87.1
Sample D Female 86.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68076533 Antisense, RP_040923_02_E04, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

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