COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:62.5 nTPM
HPA:19.1 nTPM
GTEx:62.5 nTPM
FANTOM5:45.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA002382Antibody CAB005109Antibody CAB047311
Endothelial cells LowLowLow
Glandular cells MediumMediumMedium
Peripheral nerve/ganglion LowMediumMedium







COLON - HPA RNA-seqi
Average nTPM 19.1
overview
Male, age 54 		Colon sample 67
nTPM: 26.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 19.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 26.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 30.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 14.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 23
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 10.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 15.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 14.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 17.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 13.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 19.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 16.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 62.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 62.5
Samples: 373

Max nTPM: 146.6
Min nTPM: 17.2
Std nTPM: 19.1
Median nTPM: 60.7
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 146.6
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 132.2
GTEX-1LVAO-2826-SM-E9TJH 60-69 years, male 122.7
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 122.2
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 120.6
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 116.2
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 112.3
GTEX-1R9PO-2026-SM-E9J4N 60-69 years, female 110.7
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 109.9
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 109.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 109.8
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Colon - Transverse
Average nTPM: 41.3
Samples: 406

Max nTPM: 94.2
Min nTPM: 18.0
Std nTPM: 12.0
Median nTPM: 39.3
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 94.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 91.7
GTEX-11GSP-1626-SM-5986N 60-69 years, female 86.8
GTEX-17F96-2026-SM-79ON4 70-79 years, male 80.4
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 80.2
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 78.6
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 75.3
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 73.0
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 70.9
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 70.2
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 70.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 45.7
FF:10014-101C5 62,83,84 years, mixed 45.7

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.