HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.6 nTPM
HPA:16.6 nTPM
GTEx:26.8 nTPM
FANTOM5:92.1 Scaled Tags Per Million
Pig:32.8 nTPM
Mouse:64.4 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000871Antibody HPA059017
Glial cells MediumNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.6
Sample id Sample description nTPM
Hippocampus
nTPM: 14.7
2621 Female, age 67, right hemisphere 33.0
2148 Female, age 91, left hemisphere 15.1
2529 Female, age 94, left hemisphere 13.9
1898 Male, age 80, left hemisphere 11.4
1855 Male, age 76, left hemisphere 9.4
1911 Female, age 85, right hemisphere 5.7
Dentate gyrus
nTPM: 12.1
2531 Female, age 67, both hemispheres 26.7
1927 Female, age 91, both hemispheres 19.3
2530 Female, age 94, left hemisphere 14.7
2246 Female, age 85, both hemispheres 4.4
2528 Male, age 74, both hemispheres 4.4
2010 Male, age 76, both hemispheres 3.2
Entorhinal gyrus
nTPM: 15.6
2613 Female, age 94, left hemisphere 41.2
2686 Male, age 75, right hemisphere 16.7
2764 Male, age 80, right hemisphere 16.0
1938 Female, age 85, left hemisphere 10.0
1787 Male, age 76, left hemisphere 9.5
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 12.2
2749 Male, age 80, left hemisphere 27.9
2527 Male, age 74, both hemispheres 12.6
1873 Female, age 85, both hemispheres 9.5
2082 Female, age 91, right hemisphere 8.5
2045 Male, age 76, both hemispheres 2.5
Hippocampus, CA2
nTPM: 9.7
1963 Male, age 80, left hemisphere 23.7
2437 Female, age 94, left hemisphere 13.1
1892 Male, age 76, both hemispheres 11.6
2113 Female, age 91, right hemisphere 8.8
1940 Female, age 85, left hemisphere 1.3
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 16.6
2861 Female, age 67, both hemispheres 41.0
2620 Female, age 94, left hemisphere 30.0
2137 Male, age 80, left hemisphere 22.1
1867 Male, age 76, both hemispheres 3.8
2436 Male, age 74, both hemispheres 2.6
1891 Female, age 85, both hemispheres 0.0
Parahippocampal cortex
nTPM: 12.4
2622 Female, age 67, right hemisphere 28.1
2245 Female, age 91, both hemispheres 26.0
2693 Female, age 94, both hemispheres 16.0
2250 Female, age 67, right hemisphere 12.9
1933 Female, age 85, both hemispheres 9.5
2532 Female, age 72, left hemisphere 8.2
1990 Female, age 91, right hemisphere 7.9
1850 Male, age 80, both hemispheres 7.7
2692 Male, age 74, both hemispheres 4.3
2018 Male, age 76, both hemispheres 3.9
Perirhinal gyrus
nTPM: 15.9
2521 Female, age 94, right hemisphere 23.9
1847 Female, age 91, left hemisphere 20.7
1794 Male, age 80, right hemisphere 17.4
1841 Female, age 85, right hemisphere 10.8
2848 Male, age 76, right hemisphere 6.9
Subiculum
nTPM: 1.7
2619 Male, age 74, both hemispheres 5.6
1977 Female, age 85, both hemispheres 3.9
1901 Male, age 80, both hemispheres 0.9
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.8
Samples: 197

Max nTPM: 75.0
Min nTPM: 5.1
Std nTPM: 15.0
Median nTPM: 25.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 75.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 74.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 72.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 66.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 61.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 60.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 59.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 58.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 56.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 56.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 55.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 92.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 92.1
FF:10169-103B7 60 years, female 100.4
FF:10153-102I9 76 years, female 83.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.8
Samples: 4

Max nTPM: 29.1
Min nTPM: 17.4
Sample A Female 29.1
Sample B Female 26.9
Sample C Male 21.9
Sample D Male 17.4
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 42.1
Min nTPM: 27.5
Sample A Female 33.0
Sample B Female 27.5
Sample C Male 42.1
Sample D Male 28.7
Subiculum
nTPM: 28.4
Samples: 4

Max nTPM: 40.0
Min nTPM: 21.8
Sample A Female 40.0
Sample B Female 24.0
Sample C Male 27.8
Sample D Male 21.8
Ventral hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 34.6
Min nTPM: 18.0
Sample A Female 19.4
Sample B Female 18.0
Sample C Male 34.6
Sample D Male 31.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.5
Samples: 4

Max nTPM: 76.8
Min nTPM: 54.3
Sample A Male 63.0
Sample B Male 63.7
Sample C Female 54.3
Sample D Female 76.8
Hippocampal formation
nTPM: 42.2
Samples: 4

Max nTPM: 45.1
Min nTPM: 39.7
Sample A Male 43.6
Sample B Male 45.1
Sample C Female 39.7
Sample D Female 40.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
68667377 Antisense, RP_050201_02_B07, Mouse strain C57BL/6J (56 days, male) 8.8

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