HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.9 nTPM
HPA:17.9 nTPM
GTEx:17.8 nTPM
FANTOM5:97.5 Scaled Tags Per Million
Pig:22.4 nTPM
Mouse:26.0 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003179
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.9
Sample id Sample description nTPM
Hippocampus
nTPM: 17.0
2621 Female, age 67, right hemisphere 25.9
1855 Male, age 76, left hemisphere 19.7
2529 Female, age 94, left hemisphere 18.5
1911 Female, age 85, right hemisphere 15.4
1898 Male, age 80, left hemisphere 11.9
2148 Female, age 91, left hemisphere 10.8
Dentate gyrus
nTPM: 17.4
2530 Female, age 94, left hemisphere 29.1
2531 Female, age 67, both hemispheres 22.3
2010 Male, age 76, both hemispheres 20.9
1927 Female, age 91, both hemispheres 13.0
2246 Female, age 85, both hemispheres 12.6
2528 Male, age 74, both hemispheres 6.5
Entorhinal gyrus
nTPM: 17.9
1787 Male, age 76, left hemisphere 27.4
2613 Female, age 94, left hemisphere 24.8
1938 Female, age 85, left hemisphere 19.3
2686 Male, age 75, right hemisphere 16.5
2764 Male, age 80, right hemisphere 10.2
2117 Female, age 91, right hemisphere 9.2
Hippocampus, CA1
nTPM: 15.6
2527 Male, age 74, both hemispheres 20.6
2749 Male, age 80, left hemisphere 20.2
2045 Male, age 76, both hemispheres 18.9
1873 Female, age 85, both hemispheres 9.9
2082 Female, age 91, right hemisphere 8.5
Hippocampus, CA2
nTPM: 13.6
2437 Female, age 94, left hemisphere 28.2
1940 Female, age 85, left hemisphere 17.5
1892 Male, age 76, both hemispheres 14.8
1963 Male, age 80, left hemisphere 9.8
2113 Female, age 91, right hemisphere 8.4
2249 Male, age 74, both hemispheres 2.9
Hippocampus, CA3
nTPM: 15.7
2861 Female, age 67, both hemispheres 20.8
2620 Female, age 94, left hemisphere 19.7
1891 Female, age 85, both hemispheres 19.3
1867 Male, age 76, both hemispheres 15.6
2137 Male, age 80, left hemisphere 10.5
2436 Male, age 74, both hemispheres 8.1
Parahippocampal cortex
nTPM: 14.0
2018 Male, age 76, both hemispheres 23.7
2245 Female, age 91, both hemispheres 22.2
2532 Female, age 72, left hemisphere 16.8
2622 Female, age 67, right hemisphere 16.8
1933 Female, age 85, both hemispheres 16.5
1850 Male, age 80, both hemispheres 12.9
2250 Female, age 67, right hemisphere 11.0
2692 Male, age 74, both hemispheres 7.9
2693 Female, age 94, both hemispheres 7.7
1990 Female, age 91, right hemisphere 5.0
Perirhinal gyrus
nTPM: 15.7
1794 Male, age 80, right hemisphere 22.5
1841 Female, age 85, right hemisphere 16.8
2521 Female, age 94, right hemisphere 16.6
1847 Female, age 91, left hemisphere 14.1
2848 Male, age 76, right hemisphere 8.3
Subiculum
nTPM: 14.1
2042 Male, age 76, both hemispheres 19.1
2438 Female, age 94, left hemisphere 18.9
1901 Male, age 80, both hemispheres 17.4
1977 Female, age 85, both hemispheres 12.6
2619 Male, age 74, both hemispheres 8.7
2729 Female, age 91, right hemisphere 8.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.8
Samples: 197

Max nTPM: 36.3
Min nTPM: 8.4
Std nTPM: 4.9
Median nTPM: 17.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 36.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 33.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 33.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 32.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 31.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 29.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 28.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 27.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 27.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 27.0
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 25.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.5
FF:10153-102I9 76 years, female 100.8
FF:10169-103B7 60 years, female 94.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 26.5
Min nTPM: 16.4
Sample A Female 26.5
Sample B Female 22.1
Sample C Male 24.2
Sample D Male 16.4
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 21.2
Min nTPM: 17.6
Sample A Female 20.4
Sample B Female 17.6
Sample C Male 19.0
Sample D Male 21.2
Subiculum
nTPM: 19.3
Samples: 4

Max nTPM: 22.6
Min nTPM: 17.0
Sample A Female 22.6
Sample B Female 17.5
Sample C Male 20.2
Sample D Male 17.0
Ventral hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 28.3
Min nTPM: 16.4
Sample A Female 21.2
Sample B Female 16.4
Sample C Male 28.3
Sample D Male 23.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.0
Samples: 4

Max nTPM: 26.5
Min nTPM: 22.3
Sample A Male 23.3
Sample B Male 22.3
Sample C Female 23.7
Sample D Female 26.5
Hippocampal formation
nTPM: 26.0
Samples: 4

Max nTPM: 28.6
Min nTPM: 22.9
Sample A Male 22.9
Sample B Male 28.6
Sample C Female 27.5
Sample D Female 25.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
69816673 Antisense, RP_050510_01_F02, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

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