HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.0 nTPM
HPA:12.0 nTPM
GTEx:12.9 nTPM
FANTOM5:29.9 Scaled Tags Per Million
Pig:15.6 nTPM
Mouse:20.3 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031823Antibody CAB037092
Glial cells MediumLow
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.0
Sample id Sample description nTPM
Hippocampus
nTPM: 10.7
2529 Female, age 94, left hemisphere 11.5
2621 Female, age 67, right hemisphere 11.4
1855 Male, age 76, left hemisphere 11.1
1911 Female, age 85, right hemisphere 10.3
1898 Male, age 80, left hemisphere 10.0
2148 Female, age 91, left hemisphere 9.8
Dentate gyrus
nTPM: 9.9
2530 Female, age 94, left hemisphere 11.1
2246 Female, age 85, both hemispheres 11.0
2010 Male, age 76, both hemispheres 9.7
2528 Male, age 74, both hemispheres 9.6
2531 Female, age 67, both hemispheres 9.4
1927 Female, age 91, both hemispheres 8.7
Entorhinal gyrus
nTPM: 10.4
2117 Female, age 91, right hemisphere 11.9
1938 Female, age 85, left hemisphere 11.4
1787 Male, age 76, left hemisphere 11.3
2764 Male, age 80, right hemisphere 10.4
2686 Male, age 75, right hemisphere 8.9
2613 Female, age 94, left hemisphere 8.7
Hippocampus, CA1
nTPM: 10.3
2749 Male, age 80, left hemisphere 12.1
2527 Male, age 74, both hemispheres 11.4
1873 Female, age 85, both hemispheres 9.9
2045 Male, age 76, both hemispheres 9.2
2082 Female, age 91, right hemisphere 8.9
Hippocampus, CA2
nTPM: 10.4
1892 Male, age 76, both hemispheres 11.2
1940 Female, age 85, left hemisphere 11.0
2437 Female, age 94, left hemisphere 10.6
2249 Male, age 74, both hemispheres 10.3
2113 Female, age 91, right hemisphere 9.8
1963 Male, age 80, left hemisphere 9.6
Hippocampus, CA3
nTPM: 10.0
2137 Male, age 80, left hemisphere 11.7
1867 Male, age 76, both hemispheres 11.1
2436 Male, age 74, both hemispheres 11.0
1891 Female, age 85, both hemispheres 9.7
2620 Female, age 94, left hemisphere 8.4
2861 Female, age 67, both hemispheres 8.4
Parahippocampal cortex
nTPM: 11.0
1850 Male, age 80, both hemispheres 11.8
2532 Female, age 72, left hemisphere 11.7
2018 Male, age 76, both hemispheres 11.5
2245 Female, age 91, both hemispheres 11.4
1933 Female, age 85, both hemispheres 10.9
1990 Female, age 91, right hemisphere 10.9
2692 Male, age 74, both hemispheres 10.8
2250 Female, age 67, right hemisphere 10.6
2622 Female, age 67, right hemisphere 10.5
2693 Female, age 94, both hemispheres 9.9
Perirhinal gyrus
nTPM: 11.0
2848 Male, age 76, right hemisphere 12.2
1841 Female, age 85, right hemisphere 11.2
2521 Female, age 94, right hemisphere 11.0
1794 Male, age 80, right hemisphere 10.5
1847 Female, age 91, left hemisphere 10.2
Subiculum
nTPM: 12.0
2438 Female, age 94, left hemisphere 16.9
1977 Female, age 85, both hemispheres 11.7
1901 Male, age 80, both hemispheres 11.2
2042 Male, age 76, both hemispheres 11.2
2619 Male, age 74, both hemispheres 11.0
2729 Female, age 91, right hemisphere 9.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 29.3
Min nTPM: 7.2
Std nTPM: 2.9
Median nTPM: 12.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 29.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 21.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 20.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 19.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 19.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 19.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 19.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 19.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 18.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 18.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 17.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.9
FF:10153-102I9 76 years, female 35.7
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 14.5
Min nTPM: 13.0
Sample A Female 14.5
Sample B Female 13.5
Sample C Male 13.0
Sample D Male 14.3
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 16.5
Min nTPM: 14.1
Sample A Female 16.3
Sample B Female 14.1
Sample C Male 16.5
Sample D Male 15.6
Subiculum
nTPM: 15.0
Samples: 4

Max nTPM: 15.3
Min nTPM: 14.7
Sample A Female 14.7
Sample B Female 15.3
Sample C Male 15.0
Sample D Male 15.1
Ventral hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 15.6
Min nTPM: 12.6
Sample A Female 14.9
Sample B Female 14.2
Sample C Male 15.6
Sample D Male 12.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 21.4
Min nTPM: 16.9
Sample A Male 16.9
Sample B Male 20.0
Sample C Female 19.5
Sample D Female 21.4
Hippocampal formation
nTPM: 20.4
Samples: 4

Max nTPM: 20.7
Min nTPM: 20.0
Sample A Male 20.3
Sample B Male 20.0
Sample C Female 20.7
Sample D Female 20.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
68545717 Antisense, RP_050120_01_D10, Mouse strain C57BL/6J (56 days, male) 3.1

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