COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.0 nTPM
HPA:20.3 nTPM
GTEx:35.0 nTPM
FANTOM5:27.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA048280Antibody HPA051016
Endothelial cells MediumNot detected
Glandular cells HighMedium
Peripheral nerve/ganglion Low-




COLON - HPA RNA-seqi
Average nTPM 20.3
overview
Male, age 54 		Colon sample 67
nTPM: 20.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 21.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 30.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 21.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 23
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 15
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 14.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 20.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 17.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 18.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 19.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 16
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 25.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 35.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 33.5
Samples: 373

Max nTPM: 48.9
Min nTPM: 21.2
Std nTPM: 5.1
Median nTPM: 33.2
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 48.9
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 48.7
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 47.9
GTEX-V955-1726-SM-4JBHF 60-69 years, male 46.9
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 46.5
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 46.5
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 45.9
GTEX-WXYG-1726-SM-4ONCU 50-59 years, female 45.3
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 45.2
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 45.2
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 45.1
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Colon - Transverse
Average nTPM: 35.0
Samples: 406

Max nTPM: 65.8
Min nTPM: 18.4
Std nTPM: 7.1
Median nTPM: 34.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 65.8
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 56.1
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 54.3
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 53.0
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 52.6
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 52.5
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 50.5
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 50.5
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 49.7
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 49.4
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 49.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 27.7
FF:10014-101C5 62,83,84 years, mixed 27.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.