HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:60.8 nTPM
HPA:60.8 nTPM
GTEx:34.3 nTPM
FANTOM5:306.7 Scaled Tags Per Million
Pig:102.3 nTPM
Mouse:77.1 nTPM
Allen mouse:15.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.8
Sample id Sample description nTPM
Hippocampus
nTPM: 38.1
2621 Female, age 67, right hemisphere 49.9
1898 Male, age 80, left hemisphere 47.6
1911 Female, age 85, right hemisphere 43.1
1855 Male, age 76, left hemisphere 35.2
2529 Female, age 94, left hemisphere 27.5
2148 Female, age 91, left hemisphere 25.2
Dentate gyrus
nTPM: 37.0
1927 Female, age 91, both hemispheres 52.8
2531 Female, age 67, both hemispheres 48.0
2246 Female, age 85, both hemispheres 38.8
2010 Male, age 76, both hemispheres 31.6
2530 Female, age 94, left hemisphere 30.4
2528 Male, age 74, both hemispheres 20.4
Entorhinal gyrus
nTPM: 29.3
2613 Female, age 94, left hemisphere 68.8
1938 Female, age 85, left hemisphere 30.3
2686 Male, age 75, right hemisphere 25.2
2764 Male, age 80, right hemisphere 24.7
1787 Male, age 76, left hemisphere 14.9
2117 Female, age 91, right hemisphere 12.1
Hippocampus, CA1
nTPM: 57.2
2749 Male, age 80, left hemisphere 100.2
2527 Male, age 74, both hemispheres 59.9
2045 Male, age 76, both hemispheres 50.1
1873 Female, age 85, both hemispheres 45.4
2082 Female, age 91, right hemisphere 30.3
Hippocampus, CA2
nTPM: 30.0
1892 Male, age 76, both hemispheres 43.3
2249 Male, age 74, both hemispheres 34.3
1963 Male, age 80, left hemisphere 32.4
2437 Female, age 94, left hemisphere 30.4
2113 Female, age 91, right hemisphere 27.8
1940 Female, age 85, left hemisphere 11.7
Hippocampus, CA3
nTPM: 60.8
2620 Female, age 94, left hemisphere 99.5
2137 Male, age 80, left hemisphere 98.7
1867 Male, age 76, both hemispheres 49.2
2861 Female, age 67, both hemispheres 39.9
1891 Female, age 85, both hemispheres 39.6
2436 Male, age 74, both hemispheres 38.0
Parahippocampal cortex
nTPM: 24.2
2245 Female, age 91, both hemispheres 41.1
2018 Male, age 76, both hemispheres 35.5
2250 Female, age 67, right hemisphere 33.2
2622 Female, age 67, right hemisphere 23.5
2693 Female, age 94, both hemispheres 23.5
1850 Male, age 80, both hemispheres 22.8
1990 Female, age 91, right hemisphere 22.8
2692 Male, age 74, both hemispheres 17.2
1933 Female, age 85, both hemispheres 14.3
2532 Female, age 72, left hemisphere 8.4
Perirhinal gyrus
nTPM: 23.1
1847 Female, age 91, left hemisphere 41.6
1841 Female, age 85, right hemisphere 25.2
1794 Male, age 80, right hemisphere 20.4
2848 Male, age 76, right hemisphere 16.4
2521 Female, age 94, right hemisphere 12.2
Subiculum
nTPM: 29.3
1901 Male, age 80, both hemispheres 51.2
2438 Female, age 94, left hemisphere 35.9
1977 Female, age 85, both hemispheres 30.8
2619 Male, age 74, both hemispheres 24.5
2042 Male, age 76, both hemispheres 22.4
2729 Female, age 91, right hemisphere 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.3
Samples: 197

Max nTPM: 84.1
Min nTPM: 1.3
Std nTPM: 17.6
Median nTPM: 32.1
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 84.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 82.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 80.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 80.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 78.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 75.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 73.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 72.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 68.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 67.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 66.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 306.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 306.7
FF:10153-102I9 76 years, female 306.9
FF:10169-103B7 60 years, female 306.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 102.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 102.3
Samples: 4

Max nTPM: 130.6
Min nTPM: 78.5
Sample A Female 130.6
Sample B Female 113.9
Sample C Male 86.1
Sample D Male 78.5
Entorhinal cortex
nTPM: 68.1
Samples: 4

Max nTPM: 76.3
Min nTPM: 61.2
Sample A Female 76.3
Sample B Female 63.8
Sample C Male 71.2
Sample D Male 61.2
Subiculum
nTPM: 54.6
Samples: 4

Max nTPM: 74.7
Min nTPM: 43.6
Sample A Female 74.7
Sample B Female 46.3
Sample C Male 53.7
Sample D Male 43.6
Ventral hippocampus
nTPM: 98.0
Samples: 4

Max nTPM: 120.3
Min nTPM: 60.1
Sample A Female 107.5
Sample B Female 60.1
Sample C Male 103.9
Sample D Male 120.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 77.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.5
Samples: 4

Max nTPM: 83.0
Min nTPM: 51.9
Sample A Male 59.4
Sample B Male 51.9
Sample C Female 59.8
Sample D Female 83.0
Hippocampal formation
nTPM: 77.2
Samples: 4

Max nTPM: 98.7
Min nTPM: 55.5
Sample A Male 55.5
Sample B Male 90.5
Sample C Female 98.7
Sample D Female 63.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.3
73929583 Antisense, RP_051214_03_G05, Mouse strain C57BL/6J (56 days, male) 16.0
69873600 Antisense, RP_050512_01_F01, Mouse strain C57BL/6J (56 days, male) 14.5

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The Human Protein Atlas

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