HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:68.3 nTPM
HPA:68.3 nTPM
GTEx:66.1 nTPM
FANTOM5:67.6 Scaled Tags Per Million
Pig:16.6 nTPM
Mouse:24.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA032114Antibody HPA057352Antibody CAB034296
Glial cells LowLowNot detected
Neuronal cells MediumNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.3
Sample id Sample description nTPM
Hippocampus
nTPM: 67.0
2529 Female, age 94, left hemisphere 69.8
1911 Female, age 85, right hemisphere 67.8
1898 Male, age 80, left hemisphere 67.4
1855 Male, age 76, left hemisphere 66.6
2621 Female, age 67, right hemisphere 66.5
2148 Female, age 91, left hemisphere 64.0
Dentate gyrus
nTPM: 66.1
2530 Female, age 94, left hemisphere 70.6
2010 Male, age 76, both hemispheres 68.2
2528 Male, age 74, both hemispheres 65.9
2246 Female, age 85, both hemispheres 64.9
2531 Female, age 67, both hemispheres 64.8
1927 Female, age 91, both hemispheres 62.0
Entorhinal gyrus
nTPM: 64.5
2117 Female, age 91, right hemisphere 67.4
2686 Male, age 75, right hemisphere 65.4
2764 Male, age 80, right hemisphere 64.6
1787 Male, age 76, left hemisphere 63.4
2613 Female, age 94, left hemisphere 63.2
1938 Female, age 85, left hemisphere 62.9
Hippocampus, CA1
nTPM: 64.2
2749 Male, age 80, left hemisphere 67.3
1873 Female, age 85, both hemispheres 65.4
2527 Male, age 74, both hemispheres 65.2
2082 Female, age 91, right hemisphere 62.1
2045 Male, age 76, both hemispheres 61.0
Hippocampus, CA2
nTPM: 65.7
1963 Male, age 80, left hemisphere 69.2
2249 Male, age 74, both hemispheres 66.1
1892 Male, age 76, both hemispheres 66.0
2437 Female, age 94, left hemisphere 65.7
2113 Female, age 91, right hemisphere 64.1
1940 Female, age 85, left hemisphere 63.1
Hippocampus, CA3
nTPM: 65.3
1891 Female, age 85, both hemispheres 69.2
1867 Male, age 76, both hemispheres 65.8
2137 Male, age 80, left hemisphere 64.5
2620 Female, age 94, left hemisphere 64.5
2436 Male, age 74, both hemispheres 64.0
2861 Female, age 67, both hemispheres 63.7
Parahippocampal cortex
nTPM: 63.1
2532 Female, age 72, left hemisphere 65.6
2692 Male, age 74, both hemispheres 65.6
1850 Male, age 80, both hemispheres 65.2
2018 Male, age 76, both hemispheres 64.9
1933 Female, age 85, both hemispheres 62.9
2245 Female, age 91, both hemispheres 62.6
2693 Female, age 94, both hemispheres 61.7
1990 Female, age 91, right hemisphere 61.6
2622 Female, age 67, right hemisphere 60.5
2250 Female, age 67, right hemisphere 60.4
Perirhinal gyrus
nTPM: 61.0
1841 Female, age 85, right hemisphere 62.1
1794 Male, age 80, right hemisphere 61.7
1847 Female, age 91, left hemisphere 60.8
2521 Female, age 94, right hemisphere 60.4
2848 Male, age 76, right hemisphere 60.0
Subiculum
nTPM: 68.3
2042 Male, age 76, both hemispheres 72.3
1977 Female, age 85, both hemispheres 69.4
1901 Male, age 80, both hemispheres 69.3
2438 Female, age 94, left hemisphere 68.9
2619 Male, age 74, both hemispheres 65.4
2729 Female, age 91, right hemisphere 64.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.1
Samples: 197

Max nTPM: 151.6
Min nTPM: 28.1
Std nTPM: 19.5
Median nTPM: 62.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 151.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 127.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 120.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 120.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 118.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 117.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 115.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 104.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 103.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 103.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 103.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.6
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 64.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 18.4
Min nTPM: 12.4
Sample A Female 18.4
Sample B Female 14.6
Sample C Male 17.0
Sample D Male 12.4
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 16.4
Min nTPM: 14.3
Sample A Female 16.4
Sample B Female 15.9
Sample C Male 15.5
Sample D Male 14.3
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 19.9
Min nTPM: 14.8
Sample A Female 19.9
Sample B Female 14.8
Sample C Male 16.1
Sample D Male 15.8
Ventral hippocampus
nTPM: 16.5
Samples: 4

Max nTPM: 20.7
Min nTPM: 12.5
Sample A Female 16.8
Sample B Female 12.5
Sample C Male 20.7
Sample D Male 16.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 23.8
Min nTPM: 21.1
Sample A Male 23.8
Sample B Male 21.1
Sample C Female 22.1
Sample D Female 22.1
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 24.7
Min nTPM: 23.4
Sample A Male 24.7
Sample B Male 23.4
Sample C Female 24.7
Sample D Female 23.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
70717351 Antisense, RP_050727_02_B01, Mouse strain C57BL/6J (56 days, male) 0.8

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