HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:53.7 nTPM
HPA:53.7 nTPM
GTEx:58.1 nTPM
FANTOM5:50.9 Scaled Tags Per Million
Mouse:22.0 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048677Antibody HPA056480Antibody CAB011574
Glial cells LowNot detectedMedium
Neuronal cells LowNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.7
Sample id Sample description nTPM
Hippocampus
nTPM: 44.5
2621 Female, age 67, right hemisphere 51.6
2529 Female, age 94, left hemisphere 46.6
1898 Male, age 80, left hemisphere 44.1
1911 Female, age 85, right hemisphere 43.9
2148 Female, age 91, left hemisphere 43.9
1855 Male, age 76, left hemisphere 37.1
Dentate gyrus
nTPM: 43.9
2531 Female, age 67, both hemispheres 53.3
2530 Female, age 94, left hemisphere 50.0
1927 Female, age 91, both hemispheres 44.9
2528 Male, age 74, both hemispheres 40.9
2246 Female, age 85, both hemispheres 40.4
2010 Male, age 76, both hemispheres 34.1
Entorhinal gyrus
nTPM: 52.2
2613 Female, age 94, left hemisphere 59.9
2764 Male, age 80, right hemisphere 56.3
2686 Male, age 75, right hemisphere 56.1
1787 Male, age 76, left hemisphere 50.6
1938 Female, age 85, left hemisphere 47.9
2117 Female, age 91, right hemisphere 42.3
Hippocampus, CA1
nTPM: 41.1
2527 Male, age 74, both hemispheres 43.8
2749 Male, age 80, left hemisphere 43.3
1873 Female, age 85, both hemispheres 43.1
2082 Female, age 91, right hemisphere 42.9
2045 Male, age 76, both hemispheres 32.4
Hippocampus, CA2
nTPM: 46.0
2437 Female, age 94, left hemisphere 54.3
1892 Male, age 76, both hemispheres 51.7
1963 Male, age 80, left hemisphere 50.4
2113 Female, age 91, right hemisphere 43.8
1940 Female, age 85, left hemisphere 38.8
2249 Male, age 74, both hemispheres 37.1
Hippocampus, CA3
nTPM: 47.5
2861 Female, age 67, both hemispheres 61.9
2620 Female, age 94, left hemisphere 47.3
2137 Male, age 80, left hemisphere 47.1
1867 Male, age 76, both hemispheres 45.0
1891 Female, age 85, both hemispheres 43.8
2436 Male, age 74, both hemispheres 40.0
Parahippocampal cortex
nTPM: 49.4
2622 Female, age 67, right hemisphere 59.9
2693 Female, age 94, both hemispheres 52.1
2532 Female, age 72, left hemisphere 52.0
1850 Male, age 80, both hemispheres 50.2
2245 Female, age 91, both hemispheres 50.2
2692 Male, age 74, both hemispheres 49.1
1990 Female, age 91, right hemisphere 48.9
1933 Female, age 85, both hemispheres 48.2
2250 Female, age 67, right hemisphere 43.1
2018 Male, age 76, both hemispheres 40.1
Perirhinal gyrus
nTPM: 53.7
1794 Male, age 80, right hemisphere 58.0
1841 Female, age 85, right hemisphere 55.4
2848 Male, age 76, right hemisphere 52.1
1847 Female, age 91, left hemisphere 51.9
2521 Female, age 94, right hemisphere 51.1
Subiculum
nTPM: 43.7
2619 Male, age 74, both hemispheres 51.7
2438 Female, age 94, left hemisphere 48.3
1977 Female, age 85, both hemispheres 46.6
1901 Male, age 80, both hemispheres 42.6
2729 Female, age 91, right hemisphere 37.1
2042 Male, age 76, both hemispheres 35.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.1
Samples: 197

Max nTPM: 138.7
Min nTPM: 12.8
Std nTPM: 21.7
Median nTPM: 51.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 138.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 126.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 122.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 122.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 121.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 116.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 105.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 102.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 101.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 101.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 101.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.9
FF:10153-102I9 76 years, female 66.3
FF:10169-103B7 60 years, female 35.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 24.4
Min nTPM: 19.8
Sample A Male 23.9
Sample B Male 24.4
Sample C Female 19.8
Sample D Female 19.8
Hippocampal formation
nTPM: 20.7
Samples: 4

Max nTPM: 22.7
Min nTPM: 19.2
Sample A Male 20.2
Sample B Male 20.5
Sample C Female 19.2
Sample D Female 22.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
68446081 Antisense, RP_050113_01_E03, Mouse strain C57BL/6J (56 days, male) 2.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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