HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:34.1 nTPM
HPA:34.1 nTPM
GTEx:40.1 nTPM
FANTOM5:171.2 Scaled Tags Per Million
Pig:46.6 nTPM
Mouse:72.5 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001784
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.1
Sample id Sample description nTPM
Hippocampus
nTPM: 29.5
2621 Female, age 67, right hemisphere 37.1
2529 Female, age 94, left hemisphere 34.6
2148 Female, age 91, left hemisphere 31.6
1911 Female, age 85, right hemisphere 26.6
1898 Male, age 80, left hemisphere 24.9
1855 Male, age 76, left hemisphere 22.2
Dentate gyrus
nTPM: 26.6
2530 Female, age 94, left hemisphere 33.6
2531 Female, age 67, both hemispheres 31.6
1927 Female, age 91, both hemispheres 29.9
2528 Male, age 74, both hemispheres 24.0
2246 Female, age 85, both hemispheres 21.3
2010 Male, age 76, both hemispheres 19.3
Entorhinal gyrus
nTPM: 34.1
2613 Female, age 94, left hemisphere 44.2
2686 Male, age 75, right hemisphere 41.3
2764 Male, age 80, right hemisphere 33.7
2117 Female, age 91, right hemisphere 31.9
1938 Female, age 85, left hemisphere 27.0
1787 Male, age 76, left hemisphere 26.6
Hippocampus, CA1
nTPM: 21.9
1873 Female, age 85, both hemispheres 25.4
2527 Male, age 74, both hemispheres 24.4
2749 Male, age 80, left hemisphere 24.0
2082 Female, age 91, right hemisphere 19.7
2045 Male, age 76, both hemispheres 15.9
Hippocampus, CA2
nTPM: 27.4
1963 Male, age 80, left hemisphere 38.4
2437 Female, age 94, left hemisphere 38.1
1892 Male, age 76, both hemispheres 27.4
2113 Female, age 91, right hemisphere 23.3
1940 Female, age 85, left hemisphere 19.2
2249 Male, age 74, both hemispheres 18.2
Hippocampus, CA3
nTPM: 27.4
2861 Female, age 67, both hemispheres 40.4
2620 Female, age 94, left hemisphere 29.9
1867 Male, age 76, both hemispheres 25.7
1891 Female, age 85, both hemispheres 25.2
2137 Male, age 80, left hemisphere 24.5
2436 Male, age 74, both hemispheres 18.6
Parahippocampal cortex
nTPM: 30.4
2622 Female, age 67, right hemisphere 40.9
2692 Male, age 74, both hemispheres 36.9
2532 Female, age 72, left hemisphere 34.8
2245 Female, age 91, both hemispheres 33.8
1990 Female, age 91, right hemisphere 29.4
2693 Female, age 94, both hemispheres 28.2
1850 Male, age 80, both hemispheres 27.5
2250 Female, age 67, right hemisphere 25.2
1933 Female, age 85, both hemispheres 24.6
2018 Male, age 76, both hemispheres 22.3
Perirhinal gyrus
nTPM: 28.3
1847 Female, age 91, left hemisphere 30.1
1794 Male, age 80, right hemisphere 29.1
1841 Female, age 85, right hemisphere 28.0
2848 Male, age 76, right hemisphere 27.8
2521 Female, age 94, right hemisphere 26.8
Subiculum
nTPM: 28.5
2438 Female, age 94, left hemisphere 36.0
2619 Male, age 74, both hemispheres 34.6
1977 Female, age 85, both hemispheres 26.7
1901 Male, age 80, both hemispheres 25.5
2729 Female, age 91, right hemisphere 24.4
2042 Male, age 76, both hemispheres 23.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.1
Samples: 197

Max nTPM: 81.6
Min nTPM: 20.0
Std nTPM: 11.6
Median nTPM: 37.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 81.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 80.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 75.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 72.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 71.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 71.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 69.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 69.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 68.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 67.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 63.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 171.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 171.2
FF:10153-102I9 76 years, female 205.3
FF:10169-103B7 60 years, female 137.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.9
Samples: 4

Max nTPM: 49.5
Min nTPM: 36.0
Sample A Female 49.5
Sample B Female 40.0
Sample C Male 42.0
Sample D Male 36.0
Entorhinal cortex
nTPM: 46.5
Samples: 4

Max nTPM: 54.7
Min nTPM: 40.5
Sample A Female 47.3
Sample B Female 43.4
Sample C Male 54.7
Sample D Male 40.5
Subiculum
nTPM: 44.6
Samples: 4

Max nTPM: 60.0
Min nTPM: 35.0
Sample A Female 60.0
Sample B Female 38.3
Sample C Male 45.1
Sample D Male 35.0
Ventral hippocampus
nTPM: 46.6
Samples: 4

Max nTPM: 65.2
Min nTPM: 33.1
Sample A Female 42.3
Sample B Female 33.1
Sample C Male 65.2
Sample D Male 45.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 72.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.5
Samples: 4

Max nTPM: 74.8
Min nTPM: 69.7
Sample A Male 74.8
Sample B Male 71.3
Sample C Female 69.7
Sample D Female 74.2
Hippocampal formation
nTPM: 54.7
Samples: 4

Max nTPM: 58.3
Min nTPM: 50.6
Sample A Male 58.2
Sample B Male 51.7
Sample C Female 50.6
Sample D Female 58.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
72001863 Antisense, RP_050915_02_D04, Mouse strain C57BL/6J (56 days, male) 1.0

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