HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.5 nTPM
HPA:39.5 nTPM
GTEx:39.6 nTPM
FANTOM5:43.9 Scaled Tags Per Million
Pig:6.9 nTPM
Mouse:30.1 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046787
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.5
Sample id Sample description nTPM
Hippocampus
nTPM: 38.5
2529 Female, age 94, left hemisphere 42.8
2148 Female, age 91, left hemisphere 38.9
1898 Male, age 80, left hemisphere 38.6
2621 Female, age 67, right hemisphere 37.7
1855 Male, age 76, left hemisphere 37.2
1911 Female, age 85, right hemisphere 36.0
Dentate gyrus
nTPM: 37.9
2528 Male, age 74, both hemispheres 39.4
2530 Female, age 94, left hemisphere 38.8
2531 Female, age 67, both hemispheres 38.0
1927 Female, age 91, both hemispheres 37.9
2010 Male, age 76, both hemispheres 36.8
2246 Female, age 85, both hemispheres 36.4
Entorhinal gyrus
nTPM: 37.0
2764 Male, age 80, right hemisphere 38.2
2686 Male, age 75, right hemisphere 38.0
1787 Male, age 76, left hemisphere 37.3
2117 Female, age 91, right hemisphere 37.3
2613 Female, age 94, left hemisphere 35.9
1938 Female, age 85, left hemisphere 35.1
Hippocampus, CA1
nTPM: 37.6
2749 Male, age 80, left hemisphere 40.5
2527 Male, age 74, both hemispheres 37.6
1873 Female, age 85, both hemispheres 37.5
2082 Female, age 91, right hemisphere 37.2
2045 Male, age 76, both hemispheres 35.0
Hippocampus, CA2
nTPM: 38.2
1963 Male, age 80, left hemisphere 41.2
1892 Male, age 76, both hemispheres 39.0
2113 Female, age 91, right hemisphere 38.6
2437 Female, age 94, left hemisphere 37.7
2249 Male, age 74, both hemispheres 37.1
1940 Female, age 85, left hemisphere 35.3
Hippocampus, CA3
nTPM: 39.5
2861 Female, age 67, both hemispheres 43.6
2620 Female, age 94, left hemisphere 42.9
1867 Male, age 76, both hemispheres 40.0
1891 Female, age 85, both hemispheres 38.8
2137 Male, age 80, left hemisphere 36.1
2436 Male, age 74, both hemispheres 35.3
Parahippocampal cortex
nTPM: 36.5
2692 Male, age 74, both hemispheres 39.6
1990 Female, age 91, right hemisphere 37.8
2245 Female, age 91, both hemispheres 37.4
1850 Male, age 80, both hemispheres 37.2
1933 Female, age 85, both hemispheres 36.9
2622 Female, age 67, right hemisphere 36.2
2018 Male, age 76, both hemispheres 36.1
2250 Female, age 67, right hemisphere 35.2
2532 Female, age 72, left hemisphere 34.5
2693 Female, age 94, both hemispheres 34.2
Perirhinal gyrus
nTPM: 37.2
1847 Female, age 91, left hemisphere 40.5
1794 Male, age 80, right hemisphere 38.5
1841 Female, age 85, right hemisphere 37.9
2521 Female, age 94, right hemisphere 35.1
2848 Male, age 76, right hemisphere 33.7
Subiculum
nTPM: 37.4
2619 Male, age 74, both hemispheres 38.7
1977 Female, age 85, both hemispheres 38.4
1901 Male, age 80, both hemispheres 37.9
2729 Female, age 91, right hemisphere 37.5
2438 Female, age 94, left hemisphere 36.9
2042 Male, age 76, both hemispheres 35.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.6
Samples: 197

Max nTPM: 93.0
Min nTPM: 11.1
Std nTPM: 12.3
Median nTPM: 38.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 93.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 85.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 73.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 70.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 69.3
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 68.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 68.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 65.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 62.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 62.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 58.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.9
FF:10153-102I9 76 years, female 53.3
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.2
Samples: 4

Max nTPM: 6.8
Min nTPM: 5.2
Sample A Female 6.8
Sample B Female 6.5
Sample C Male 5.2
Sample D Male 6.3
Entorhinal cortex
nTPM: 6.6
Samples: 4

Max nTPM: 6.9
Min nTPM: 6.4
Sample A Female 6.4
Sample B Female 6.5
Sample C Male 6.4
Sample D Male 6.9
Subiculum
nTPM: 6.7
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.8
Sample A Female 7.4
Sample B Female 7.1
Sample C Male 6.4
Sample D Male 5.8
Ventral hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.4
Sample A Female 6.4
Sample B Female 6.7
Sample C Male 8.1
Sample D Male 6.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.4
Samples: 4

Max nTPM: 31.8
Min nTPM: 23.4
Sample A Male 31.8
Sample B Male 23.4
Sample C Female 29.0
Sample D Female 25.5
Hippocampal formation
nTPM: 30.1
Samples: 4

Max nTPM: 35.7
Min nTPM: 25.3
Sample A Male 35.7
Sample B Male 25.3
Sample C Female 30.3
Sample D Female 29.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
393250 Antisense, RP_040804_02_H09, Mouse strain C57BL/6J (56 days, male) 4.1
81599664 Antisense, RP_071217_04_E06, Mouse strain C57BL/6J (56 days, male) 2.2

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The Human Protein Atlas

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