HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:92.5 nTPM
HPA:92.5 nTPM
GTEx:199.8 nTPM
FANTOM5:87.5 Scaled Tags Per Million
Pig:21.7 nTPM
Mouse:42.1 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055230
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.5
Sample id Sample description nTPM
Hippocampus
nTPM: 92.5
2621 Female, age 67, right hemisphere 99.5
1855 Male, age 76, left hemisphere 96.4
2148 Female, age 91, left hemisphere 95.7
1898 Male, age 80, left hemisphere 93.1
1911 Female, age 85, right hemisphere 85.4
2529 Female, age 94, left hemisphere 85.1
Dentate gyrus
nTPM: 88.7
2530 Female, age 94, left hemisphere 104.6
2010 Male, age 76, both hemispheres 96.0
1927 Female, age 91, both hemispheres 88.6
2531 Female, age 67, both hemispheres 86.6
2528 Male, age 74, both hemispheres 82.3
2246 Female, age 85, both hemispheres 74.3
Entorhinal gyrus
nTPM: 90.0
2117 Female, age 91, right hemisphere 95.8
2613 Female, age 94, left hemisphere 95.5
1938 Female, age 85, left hemisphere 90.8
2764 Male, age 80, right hemisphere 90.5
2686 Male, age 75, right hemisphere 88.2
1787 Male, age 76, left hemisphere 78.9
Hippocampus, CA1
nTPM: 87.6
2749 Male, age 80, left hemisphere 110.5
1873 Female, age 85, both hemispheres 93.9
2527 Male, age 74, both hemispheres 87.1
2045 Male, age 76, both hemispheres 76.1
2082 Female, age 91, right hemisphere 70.4
Hippocampus, CA2
nTPM: 87.8
1963 Male, age 80, left hemisphere 131.0
2437 Female, age 94, left hemisphere 87.3
1892 Male, age 76, both hemispheres 82.1
2113 Female, age 91, right hemisphere 77.2
2249 Male, age 74, both hemispheres 75.3
1940 Female, age 85, left hemisphere 74.1
Hippocampus, CA3
nTPM: 82.9
2861 Female, age 67, both hemispheres 98.8
2620 Female, age 94, left hemisphere 83.6
2137 Male, age 80, left hemisphere 82.0
1891 Female, age 85, both hemispheres 80.4
1867 Male, age 76, both hemispheres 78.2
2436 Male, age 74, both hemispheres 74.1
Parahippocampal cortex
nTPM: 82.1
2532 Female, age 72, left hemisphere 93.8
2692 Male, age 74, both hemispheres 86.8
1850 Male, age 80, both hemispheres 84.8
2622 Female, age 67, right hemisphere 84.4
1933 Female, age 85, both hemispheres 84.2
2245 Female, age 91, both hemispheres 81.8
1990 Female, age 91, right hemisphere 81.0
2018 Male, age 76, both hemispheres 79.2
2693 Female, age 94, both hemispheres 73.3
2250 Female, age 67, right hemisphere 72.1
Perirhinal gyrus
nTPM: 78.1
1847 Female, age 91, left hemisphere 82.7
1841 Female, age 85, right hemisphere 82.5
1794 Male, age 80, right hemisphere 80.9
2521 Female, age 94, right hemisphere 72.2
2848 Male, age 76, right hemisphere 72.2
Subiculum
nTPM: 84.0
1901 Male, age 80, both hemispheres 87.3
2042 Male, age 76, both hemispheres 86.9
2619 Male, age 74, both hemispheres 85.3
2729 Female, age 91, right hemisphere 84.0
2438 Female, age 94, left hemisphere 83.2
1977 Female, age 85, both hemispheres 77.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 199.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 199.8
Samples: 197

Max nTPM: 347.5
Min nTPM: 40.9
Std nTPM: 44.0
Median nTPM: 195.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 347.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 316.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 315.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 294.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 291.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 288.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 288.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 278.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 276.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 274.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 271.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 87.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.5
FF:10153-102I9 76 years, female 101.9
FF:10169-103B7 60 years, female 73.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.9
Samples: 4

Max nTPM: 24.0
Min nTPM: 16.0
Sample A Female 24.0
Sample B Female 20.7
Sample C Male 19.0
Sample D Male 16.0
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 25.4
Min nTPM: 18.0
Sample A Female 22.4
Sample B Female 21.1
Sample C Male 25.4
Sample D Male 18.0
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 22.7
Min nTPM: 15.0
Sample A Female 22.7
Sample B Female 15.0
Sample C Male 16.1
Sample D Male 17.3
Ventral hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 21.6
Min nTPM: 13.5
Sample A Female 13.5
Sample B Female 14.3
Sample C Male 21.6
Sample D Male 20.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.8
Samples: 4

Max nTPM: 35.9
Min nTPM: 27.5
Sample A Male 30.0
Sample B Male 27.5
Sample C Female 33.6
Sample D Female 35.9
Hippocampal formation
nTPM: 42.1
Samples: 4

Max nTPM: 56.5
Min nTPM: 32.2
Sample A Male 32.2
Sample B Male 36.4
Sample C Female 56.5
Sample D Female 43.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
71923998 Antisense, RP_051017_02_H03, Mouse strain C57BL/6J (56 days, male) 4.1
75694351 Antisense, RP_060518_03_F03, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

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