HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:54.3 nTPM
HPA:54.3 nTPM
GTEx:94.9 nTPM
FANTOM5:199.6 Scaled Tags Per Million
Pig:221.5 nTPM
Mouse:379.7 nTPM
Allen mouse:17.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031636Antibody HPA076665
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.3
Sample id Sample description nTPM
Hippocampus
nTPM: 45.4
1898 Male, age 80, left hemisphere 60.9
2148 Female, age 91, left hemisphere 46.8
2621 Female, age 67, right hemisphere 45.8
1855 Male, age 76, left hemisphere 44.7
1911 Female, age 85, right hemisphere 39.0
2529 Female, age 94, left hemisphere 35.3
Dentate gyrus
nTPM: 45.0
1927 Female, age 91, both hemispheres 61.2
2530 Female, age 94, left hemisphere 49.1
2528 Male, age 74, both hemispheres 43.3
2246 Female, age 85, both hemispheres 42.9
2010 Male, age 76, both hemispheres 42.5
2531 Female, age 67, both hemispheres 31.0
Entorhinal gyrus
nTPM: 38.2
1938 Female, age 85, left hemisphere 42.6
2764 Male, age 80, right hemisphere 40.5
2613 Female, age 94, left hemisphere 39.9
2117 Female, age 91, right hemisphere 38.8
1787 Male, age 76, left hemisphere 36.5
2686 Male, age 75, right hemisphere 30.9
Hippocampus, CA1
nTPM: 54.3
2749 Male, age 80, left hemisphere 89.9
1873 Female, age 85, both hemispheres 59.9
2527 Male, age 74, both hemispheres 52.2
2082 Female, age 91, right hemisphere 38.0
2045 Male, age 76, both hemispheres 31.6
Hippocampus, CA2
nTPM: 46.0
1963 Male, age 80, left hemisphere 78.5
1892 Male, age 76, both hemispheres 52.9
2249 Male, age 74, both hemispheres 41.6
2113 Female, age 91, right hemisphere 37.8
2437 Female, age 94, left hemisphere 36.2
1940 Female, age 85, left hemisphere 28.8
Hippocampus, CA3
nTPM: 42.0
2137 Male, age 80, left hemisphere 67.8
2436 Male, age 74, both hemispheres 42.3
2620 Female, age 94, left hemisphere 38.3
2861 Female, age 67, both hemispheres 37.0
1867 Male, age 76, both hemispheres 34.9
1891 Female, age 85, both hemispheres 31.5
Parahippocampal cortex
nTPM: 36.1
2245 Female, age 91, both hemispheres 46.7
2250 Female, age 67, right hemisphere 41.4
1933 Female, age 85, both hemispheres 41.0
1990 Female, age 91, right hemisphere 38.5
1850 Male, age 80, both hemispheres 37.7
2692 Male, age 74, both hemispheres 36.0
2693 Female, age 94, both hemispheres 35.1
2018 Male, age 76, both hemispheres 29.4
2622 Female, age 67, right hemisphere 28.9
2532 Female, age 72, left hemisphere 26.8
Perirhinal gyrus
nTPM: 41.5
1847 Female, age 91, left hemisphere 59.1
1794 Male, age 80, right hemisphere 42.6
2521 Female, age 94, right hemisphere 42.6
1841 Female, age 85, right hemisphere 32.5
2848 Male, age 76, right hemisphere 30.9
Subiculum
nTPM: 36.0
1901 Male, age 80, both hemispheres 41.5
2619 Male, age 74, both hemispheres 40.9
2729 Female, age 91, right hemisphere 35.9
1977 Female, age 85, both hemispheres 34.9
2042 Male, age 76, both hemispheres 32.4
2438 Female, age 94, left hemisphere 30.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 94.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.9
Samples: 197

Max nTPM: 303.2
Min nTPM: 9.9
Std nTPM: 56.4
Median nTPM: 85.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 303.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 291.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 279.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 270.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 256.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 234.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 221.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 216.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 214.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 207.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 200.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 199.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 199.6
FF:10169-103B7 60 years, female 287.7
FF:10153-102I9 76 years, female 111.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 221.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 221.5
Samples: 4

Max nTPM: 334.2
Min nTPM: 123.4
Sample A Female 334.2
Sample B Female 265.9
Sample C Male 123.4
Sample D Male 162.5
Entorhinal cortex
nTPM: 75.3
Samples: 4

Max nTPM: 91.5
Min nTPM: 55.6
Sample A Female 91.5
Sample B Female 62.5
Sample C Male 91.5
Sample D Male 55.6
Subiculum
nTPM: 105.6
Samples: 4

Max nTPM: 136.3
Min nTPM: 85.6
Sample A Female 136.3
Sample B Female 93.7
Sample C Male 106.6
Sample D Male 85.6
Ventral hippocampus
nTPM: 174.4
Samples: 4

Max nTPM: 250.9
Min nTPM: 108.0
Sample A Female 172.6
Sample B Female 108.0
Sample C Male 166.2
Sample D Male 250.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 379.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 178.7
Samples: 4

Max nTPM: 231.7
Min nTPM: 129.5
Sample A Male 133.3
Sample B Male 129.5
Sample C Female 231.7
Sample D Female 220.3
Hippocampal formation
nTPM: 379.7
Samples: 4

Max nTPM: 408.7
Min nTPM: 343.6
Sample A Male 343.6
Sample B Male 408.7
Sample C Female 394.9
Sample D Female 371.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.9
73769322 Antisense, RP_051121_04_B07, Mouse strain C57BL/6J (56 days, male) 18.7
69837190 Antisense, RP_050217_01_C07, Mouse strain C57BL/6J (56 days, male) 17.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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