HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:38.8 nTPM
HPA:38.8 nTPM
GTEx:35.4 nTPM
FANTOM5:31.1 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:31.1 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041225Antibody HPA044675
Glial cells LowNot detected
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.8
Sample id Sample description nTPM
Hippocampus
nTPM: 37.4
1898 Male, age 80, left hemisphere 41.9
1855 Male, age 76, left hemisphere 37.6
2621 Female, age 67, right hemisphere 37.5
2529 Female, age 94, left hemisphere 36.4
1911 Female, age 85, right hemisphere 35.6
2148 Female, age 91, left hemisphere 35.6
Dentate gyrus
nTPM: 37.4
2530 Female, age 94, left hemisphere 41.1
2010 Male, age 76, both hemispheres 38.4
1927 Female, age 91, both hemispheres 36.9
2246 Female, age 85, both hemispheres 36.7
2528 Male, age 74, both hemispheres 36.3
2531 Female, age 67, both hemispheres 35.1
Entorhinal gyrus
nTPM: 38.8
1938 Female, age 85, left hemisphere 40.6
2764 Male, age 80, right hemisphere 40.2
1787 Male, age 76, left hemisphere 39.6
2613 Female, age 94, left hemisphere 39.5
2117 Female, age 91, right hemisphere 37.1
2686 Male, age 75, right hemisphere 35.9
Hippocampus, CA1
nTPM: 37.7
2749 Male, age 80, left hemisphere 43.4
1873 Female, age 85, both hemispheres 36.9
2082 Female, age 91, right hemisphere 36.2
2527 Male, age 74, both hemispheres 36.0
2045 Male, age 76, both hemispheres 35.8
Hippocampus, CA2
nTPM: 38.1
1963 Male, age 80, left hemisphere 41.5
1892 Male, age 76, both hemispheres 41.4
2437 Female, age 94, left hemisphere 37.5
2249 Male, age 74, both hemispheres 37.2
1940 Female, age 85, left hemisphere 35.8
2113 Female, age 91, right hemisphere 35.0
Hippocampus, CA3
nTPM: 37.7
1867 Male, age 76, both hemispheres 40.7
2137 Male, age 80, left hemisphere 39.4
2436 Male, age 74, both hemispheres 38.9
1891 Female, age 85, both hemispheres 37.1
2861 Female, age 67, both hemispheres 35.4
2620 Female, age 94, left hemisphere 34.5
Parahippocampal cortex
nTPM: 36.5
1990 Female, age 91, right hemisphere 39.0
1850 Male, age 80, both hemispheres 38.5
1933 Female, age 85, both hemispheres 38.1
2532 Female, age 72, left hemisphere 37.4
2018 Male, age 76, both hemispheres 36.8
2692 Male, age 74, both hemispheres 36.0
2250 Female, age 67, right hemisphere 35.8
2622 Female, age 67, right hemisphere 35.1
2245 Female, age 91, both hemispheres 34.9
2693 Female, age 94, both hemispheres 33.7
Perirhinal gyrus
nTPM: 38.0
1847 Female, age 91, left hemisphere 41.3
1794 Male, age 80, right hemisphere 38.0
2521 Female, age 94, right hemisphere 37.3
2848 Male, age 76, right hemisphere 36.7
1841 Female, age 85, right hemisphere 36.5
Subiculum
nTPM: 37.5
1977 Female, age 85, both hemispheres 41.2
1901 Male, age 80, both hemispheres 39.1
2042 Male, age 76, both hemispheres 37.3
2438 Female, age 94, left hemisphere 37.2
2619 Male, age 74, both hemispheres 35.6
2729 Female, age 91, right hemisphere 34.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.4
Samples: 197

Max nTPM: 56.4
Min nTPM: 18.5
Std nTPM: 6.0
Median nTPM: 35.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 56.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 50.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 49.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 48.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 48.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 48.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 47.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 46.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 46.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 45.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.1
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 28.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 20.5
Min nTPM: 10.3
Sample A Female 20.5
Sample B Female 15.7
Sample C Male 14.3
Sample D Male 10.3
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 14.1
Min nTPM: 10.0
Sample A Female 13.2
Sample B Female 14.1
Sample C Male 12.3
Sample D Male 10.0
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.7
Sample A Female 15.6
Sample B Female 10.7
Sample C Male 11.0
Sample D Male 10.7
Ventral hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 9.4
Sample A Female 15.5
Sample B Female 9.4
Sample C Male 17.1
Sample D Male 14.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.6
Samples: 4

Max nTPM: 28.9
Min nTPM: 26.5
Sample A Male 28.9
Sample B Male 27.1
Sample C Female 27.9
Sample D Female 26.5
Hippocampal formation
nTPM: 31.1
Samples: 4

Max nTPM: 32.8
Min nTPM: 29.4
Sample A Male 31.5
Sample B Male 29.4
Sample C Female 32.8
Sample D Female 30.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
68341495 Antisense, RP_041207_01_F07, Mouse strain C57BL/6J (56 days, male) 2.2
70919113 Antisense, RP_050712_04_B11, Mouse strain C57BL/6J (56 days, male) 0.0

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