HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:21.1 nTPM
HPA:21.1 nTPM
GTEx:20.3 nTPM
FANTOM5:37.3 Scaled Tags Per Million
Pig:19.8 nTPM
Mouse:39.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.1
Sample id Sample description nTPM
Hippocampus
nTPM: 19.2
1898 Male, age 80, left hemisphere 23.9
1855 Male, age 76, left hemisphere 22.5
2621 Female, age 67, right hemisphere 19.8
1911 Female, age 85, right hemisphere 17.1
2148 Female, age 91, left hemisphere 17.0
2529 Female, age 94, left hemisphere 14.9
Dentate gyrus
nTPM: 18.7
2010 Male, age 76, both hemispheres 21.5
2530 Female, age 94, left hemisphere 20.5
2246 Female, age 85, both hemispheres 19.3
2528 Male, age 74, both hemispheres 18.7
2531 Female, age 67, both hemispheres 17.4
1927 Female, age 91, both hemispheres 14.8
Entorhinal gyrus
nTPM: 17.8
2764 Male, age 80, right hemisphere 22.7
2117 Female, age 91, right hemisphere 20.2
1787 Male, age 76, left hemisphere 16.8
1938 Female, age 85, left hemisphere 16.6
2686 Male, age 75, right hemisphere 15.8
2613 Female, age 94, left hemisphere 14.7
Hippocampus, CA1
nTPM: 18.2
2082 Female, age 91, right hemisphere 20.0
2045 Male, age 76, both hemispheres 19.7
1873 Female, age 85, both hemispheres 17.5
2749 Male, age 80, left hemisphere 17.1
2527 Male, age 74, both hemispheres 16.6
Hippocampus, CA2
nTPM: 20.9
1940 Female, age 85, left hemisphere 26.0
1963 Male, age 80, left hemisphere 21.6
1892 Male, age 76, both hemispheres 21.2
2437 Female, age 94, left hemisphere 20.4
2113 Female, age 91, right hemisphere 18.9
2249 Male, age 74, both hemispheres 17.5
Hippocampus, CA3
nTPM: 16.2
1867 Male, age 76, both hemispheres 18.7
1891 Female, age 85, both hemispheres 18.4
2861 Female, age 67, both hemispheres 18.3
2137 Male, age 80, left hemisphere 16.0
2436 Male, age 74, both hemispheres 13.0
2620 Female, age 94, left hemisphere 12.8
Parahippocampal cortex
nTPM: 19.3
2532 Female, age 72, left hemisphere 24.1
2018 Male, age 76, both hemispheres 22.2
1850 Male, age 80, both hemispheres 20.8
2693 Female, age 94, both hemispheres 19.3
2245 Female, age 91, both hemispheres 19.2
2622 Female, age 67, right hemisphere 18.7
1933 Female, age 85, both hemispheres 18.1
2250 Female, age 67, right hemisphere 18.0
1990 Female, age 91, right hemisphere 16.6
2692 Male, age 74, both hemispheres 16.2
Perirhinal gyrus
nTPM: 21.1
2521 Female, age 94, right hemisphere 28.3
1794 Male, age 80, right hemisphere 24.1
1841 Female, age 85, right hemisphere 19.8
2848 Male, age 76, right hemisphere 17.2
1847 Female, age 91, left hemisphere 16.2
Subiculum
nTPM: 18.8
1901 Male, age 80, both hemispheres 22.2
1977 Female, age 85, both hemispheres 19.7
2729 Female, age 91, right hemisphere 18.6
2619 Male, age 74, both hemispheres 18.1
2042 Male, age 76, both hemispheres 17.8
2438 Female, age 94, left hemisphere 16.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.3
Samples: 197

Max nTPM: 53.9
Min nTPM: 6.1
Std nTPM: 7.1
Median nTPM: 19.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 53.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 45.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 42.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 38.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 37.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 35.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 35.0
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 34.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 32.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 32.5
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 32.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.3
FF:10153-102I9 76 years, female 42.2
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 24.4
Min nTPM: 13.0
Sample A Female 24.1
Sample B Female 24.4
Sample C Male 13.0
Sample D Male 14.7
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 22.0
Min nTPM: 17.3
Sample A Female 19.3
Sample B Female 22.0
Sample C Male 17.3
Sample D Male 20.5
Subiculum
nTPM: 6.1
Samples: 4

Max nTPM: 8.4
Min nTPM: 3.9
Sample A Female 8.4
Sample B Female 3.9
Sample C Male 7.7
Sample D Male 4.5
Ventral hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 23.1
Min nTPM: 12.3
Sample A Female 17.2
Sample B Female 12.3
Sample C Male 15.3
Sample D Male 23.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.9
Samples: 4

Max nTPM: 36.7
Min nTPM: 16.5
Sample A Male 30.8
Sample B Male 36.7
Sample C Female 23.7
Sample D Female 16.5
Hippocampal formation
nTPM: 39.8
Samples: 4

Max nTPM: 51.0
Min nTPM: 32.3
Sample A Male 36.5
Sample B Male 39.2
Sample C Female 51.0
Sample D Female 32.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
73931426 Antisense, RP_051214_04_F06, Mouse strain C57BL/6J (56 days, male) 0.2
70723307 Antisense, RP_050630_04_H05, Mouse strain C57BL/6J (56 days, male) 0.2

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