HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:8.2 nTPM
HPA:8.2 nTPM
GTEx:5.7 nTPM
FANTOM5:21.3 Scaled Tags Per Million
Pig:40.9 nTPM
Mouse:68.1 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.2
Sample id Sample description nTPM
Hippocampus
nTPM: 3.3
1855 Male, age 76, left hemisphere 4.4
2148 Female, age 91, left hemisphere 4.4
2621 Female, age 67, right hemisphere 3.8
1898 Male, age 80, left hemisphere 2.5
1911 Female, age 85, right hemisphere 2.4
2529 Female, age 94, left hemisphere 2.3
Dentate gyrus
nTPM: 3.7
2531 Female, age 67, both hemispheres 6.6
1927 Female, age 91, both hemispheres 5.3
2246 Female, age 85, both hemispheres 4.3
2528 Male, age 74, both hemispheres 2.9
2010 Male, age 76, both hemispheres 2.7
2530 Female, age 94, left hemisphere 0.1
Entorhinal gyrus
nTPM: 5.0
1938 Female, age 85, left hemisphere 7.7
1787 Male, age 76, left hemisphere 5.7
2613 Female, age 94, left hemisphere 5.7
2686 Male, age 75, right hemisphere 4.3
2764 Male, age 80, right hemisphere 4.0
2117 Female, age 91, right hemisphere 2.4
Hippocampus, CA1
nTPM: 4.4
2045 Male, age 76, both hemispheres 8.9
1873 Female, age 85, both hemispheres 4.1
2749 Male, age 80, left hemisphere 3.5
2527 Male, age 74, both hemispheres 2.9
2082 Female, age 91, right hemisphere 2.7
Hippocampus, CA2
nTPM: 2.5
1892 Male, age 76, both hemispheres 5.1
2437 Female, age 94, left hemisphere 3.0
1940 Female, age 85, left hemisphere 2.3
2113 Female, age 91, right hemisphere 2.2
2249 Male, age 74, both hemispheres 1.2
1963 Male, age 80, left hemisphere 1.0
Hippocampus, CA3
nTPM: 4.1
2620 Female, age 94, left hemisphere 6.2
2861 Female, age 67, both hemispheres 5.5
1867 Male, age 76, both hemispheres 4.2
2137 Male, age 80, left hemisphere 3.5
1891 Female, age 85, both hemispheres 3.1
2436 Male, age 74, both hemispheres 2.0
Parahippocampal cortex
nTPM: 5.2
2622 Female, age 67, right hemisphere 6.7
1850 Male, age 80, both hemispheres 6.3
2250 Female, age 67, right hemisphere 6.3
2693 Female, age 94, both hemispheres 6.2
1933 Female, age 85, both hemispheres 5.5
2532 Female, age 72, left hemisphere 4.8
1990 Female, age 91, right hemisphere 4.5
2245 Female, age 91, both hemispheres 4.5
2692 Male, age 74, both hemispheres 4.0
2018 Male, age 76, both hemispheres 3.1
Perirhinal gyrus
nTPM: 8.2
1794 Male, age 80, right hemisphere 9.5
1847 Female, age 91, left hemisphere 9.2
1841 Female, age 85, right hemisphere 8.8
2848 Male, age 76, right hemisphere 7.1
2521 Female, age 94, right hemisphere 6.5
Subiculum
nTPM: 2.9
1977 Female, age 85, both hemispheres 4.7
2438 Female, age 94, left hemisphere 4.2
2619 Male, age 74, both hemispheres 3.9
2729 Female, age 91, right hemisphere 2.4
1901 Male, age 80, both hemispheres 1.5
2042 Male, age 76, both hemispheres 0.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.7
Samples: 197

Max nTPM: 15.7
Min nTPM: 1.0
Std nTPM: 3.1
Median nTPM: 5.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 15.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 13.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 13.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 13.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 13.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 13.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 12.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 12.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 12.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 12.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 12.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.3
FF:10153-102I9 76 years, female 24.9
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 24.4
Min nTPM: 19.6
Sample A Female 19.6
Sample B Female 19.6
Sample C Male 24.4
Sample D Male 22.1
Entorhinal cortex
nTPM: 40.9
Samples: 4

Max nTPM: 53.8
Min nTPM: 35.5
Sample A Female 38.1
Sample B Female 35.5
Sample C Male 53.8
Sample D Male 36.1
Subiculum
nTPM: 37.6
Samples: 4

Max nTPM: 45.5
Min nTPM: 31.5
Sample A Female 45.5
Sample B Female 37.8
Sample C Male 35.7
Sample D Male 31.5
Ventral hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 28.9
Min nTPM: 16.3
Sample A Female 22.1
Sample B Female 28.9
Sample C Male 25.2
Sample D Male 16.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 68.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.1
Samples: 4

Max nTPM: 81.8
Min nTPM: 57.2
Sample A Male 57.2
Sample B Male 70.9
Sample C Female 62.6
Sample D Female 81.8
Hippocampal formation
nTPM: 53.2
Samples: 4

Max nTPM: 59.5
Min nTPM: 48.9
Sample A Male 53.6
Sample B Male 50.8
Sample C Female 59.5
Sample D Female 48.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
76115737 Antisense, RP_060620_02_C05, Mouse strain C57BL/6J (56 days, male) 2.2
69782300 Antisense, RP_050505_02_F12, Mouse strain C57BL/6J (56 days, male) 0.4
74357809 Antisense, RP_051219_04_B03, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

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