HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:95.5 nTPM
HPA:95.5 nTPM
GTEx:79.1 nTPM
FANTOM5:77.3 Scaled Tags Per Million
Mouse:48.2 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031572Antibody HPA031573
Glial cells MediumMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 95.5
Sample id Sample description nTPM
Hippocampus
nTPM: 92.8
2529 Female, age 94, left hemisphere 107.5
1898 Male, age 80, left hemisphere 94.1
2148 Female, age 91, left hemisphere 93.3
2621 Female, age 67, right hemisphere 90.6
1855 Male, age 76, left hemisphere 86.1
1911 Female, age 85, right hemisphere 85.3
Dentate gyrus
nTPM: 91.9
2528 Male, age 74, both hemispheres 102.0
2530 Female, age 94, left hemisphere 93.0
1927 Female, age 91, both hemispheres 92.6
2010 Male, age 76, both hemispheres 90.4
2246 Female, age 85, both hemispheres 88.4
2531 Female, age 67, both hemispheres 84.9
Entorhinal gyrus
nTPM: 93.3
2764 Male, age 80, right hemisphere 98.6
2117 Female, age 91, right hemisphere 97.0
1787 Male, age 76, left hemisphere 94.1
1938 Female, age 85, left hemisphere 94.1
2686 Male, age 75, right hemisphere 89.3
2613 Female, age 94, left hemisphere 86.9
Hippocampus, CA1
nTPM: 92.7
2527 Male, age 74, both hemispheres 105.0
2082 Female, age 91, right hemisphere 94.1
2749 Male, age 80, left hemisphere 93.8
1873 Female, age 85, both hemispheres 86.7
2045 Male, age 76, both hemispheres 83.9
Hippocampus, CA2
nTPM: 93.9
2249 Male, age 74, both hemispheres 110.2
2437 Female, age 94, left hemisphere 94.6
2113 Female, age 91, right hemisphere 93.6
1892 Male, age 76, both hemispheres 89.7
1963 Male, age 80, left hemisphere 89.6
1940 Female, age 85, left hemisphere 85.8
Hippocampus, CA3
nTPM: 91.0
2436 Male, age 74, both hemispheres 104.6
2137 Male, age 80, left hemisphere 90.2
2620 Female, age 94, left hemisphere 90.2
1867 Male, age 76, both hemispheres 89.6
1891 Female, age 85, both hemispheres 87.0
2861 Female, age 67, both hemispheres 84.5
Parahippocampal cortex
nTPM: 92.7
1990 Female, age 91, right hemisphere 102.4
2250 Female, age 67, right hemisphere 97.7
2245 Female, age 91, both hemispheres 95.8
1850 Male, age 80, both hemispheres 94.1
2532 Female, age 72, left hemisphere 93.0
2692 Male, age 74, both hemispheres 91.4
2018 Male, age 76, both hemispheres 90.4
1933 Female, age 85, both hemispheres 90.0
2622 Female, age 67, right hemisphere 86.2
2693 Female, age 94, both hemispheres 85.6
Perirhinal gyrus
nTPM: 95.5
1847 Female, age 91, left hemisphere 101.2
2521 Female, age 94, right hemisphere 98.3
1794 Male, age 80, right hemisphere 97.2
1841 Female, age 85, right hemisphere 93.1
2848 Male, age 76, right hemisphere 87.7
Subiculum
nTPM: 91.2
2619 Male, age 74, both hemispheres 96.8
1977 Female, age 85, both hemispheres 92.7
2729 Female, age 91, right hemisphere 91.2
2438 Female, age 94, left hemisphere 91.0
1901 Male, age 80, both hemispheres 88.9
2042 Male, age 76, both hemispheres 86.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.1
Samples: 197

Max nTPM: 111.9
Min nTPM: 52.9
Std nTPM: 11.0
Median nTPM: 78.4
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 111.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 109.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 104.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 104.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 103.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 101.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 99.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 98.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 98.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 97.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 97.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.3
FF:10169-103B7 60 years, female 83.7
FF:10153-102I9 76 years, female 70.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.2
Samples: 4

Max nTPM: 54.4
Min nTPM: 43.9
Sample A Male 43.9
Sample B Male 48.3
Sample C Female 54.4
Sample D Female 46.2
Hippocampal formation
nTPM: 45.0
Samples: 4

Max nTPM: 52.0
Min nTPM: 39.3
Sample A Male 52.0
Sample B Male 42.2
Sample C Female 39.3
Sample D Female 46.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
71836892 Antisense, RP_051017_02_F10, Mouse strain C57BL/6J (56 days, male) 4.2
68744964 Antisense, RP_050210_01_A05, Mouse strain C57BL/6J (56 days, male) 2.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.