HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:34.1 nTPM
HPA:34.1 nTPM
GTEx:38.2 nTPM
FANTOM5:159.8 Scaled Tags Per Million
Pig:19.9 nTPM
Mouse:80.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000325Antibody HPA000967
Glial cells Not detectedNot detected
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.1
Sample id Sample description nTPM
Hippocampus
nTPM: 30.7
1898 Male, age 80, left hemisphere 38.4
2621 Female, age 67, right hemisphere 31.9
2529 Female, age 94, left hemisphere 29.4
2148 Female, age 91, left hemisphere 29.3
1855 Male, age 76, left hemisphere 28.3
1911 Female, age 85, right hemisphere 26.9
Dentate gyrus
nTPM: 30.2
2010 Male, age 76, both hemispheres 35.1
1927 Female, age 91, both hemispheres 32.3
2530 Female, age 94, left hemisphere 30.6
2528 Male, age 74, both hemispheres 30.5
2246 Female, age 85, both hemispheres 27.2
2531 Female, age 67, both hemispheres 25.5
Entorhinal gyrus
nTPM: 29.4
2117 Female, age 91, right hemisphere 31.5
1938 Female, age 85, left hemisphere 30.5
2764 Male, age 80, right hemisphere 30.1
2686 Male, age 75, right hemisphere 29.5
1787 Male, age 76, left hemisphere 28.2
2613 Female, age 94, left hemisphere 26.5
Hippocampus, CA1
nTPM: 34.1
2749 Male, age 80, left hemisphere 48.1
1873 Female, age 85, both hemispheres 34.7
2527 Male, age 74, both hemispheres 31.8
2045 Male, age 76, both hemispheres 29.1
2082 Female, age 91, right hemisphere 26.8
Hippocampus, CA2
nTPM: 31.6
1892 Male, age 76, both hemispheres 37.7
1963 Male, age 80, left hemisphere 37.0
2249 Male, age 74, both hemispheres 30.7
2437 Female, age 94, left hemisphere 28.6
1940 Female, age 85, left hemisphere 28.3
2113 Female, age 91, right hemisphere 27.6
Hippocampus, CA3
nTPM: 31.2
2137 Male, age 80, left hemisphere 40.6
1867 Male, age 76, both hemispheres 36.8
1891 Female, age 85, both hemispheres 30.2
2436 Male, age 74, both hemispheres 28.0
2620 Female, age 94, left hemisphere 26.8
2861 Female, age 67, both hemispheres 24.8
Parahippocampal cortex
nTPM: 28.8
1850 Male, age 80, both hemispheres 33.9
1990 Female, age 91, right hemisphere 31.5
2018 Male, age 76, both hemispheres 29.9
2245 Female, age 91, both hemispheres 29.8
2532 Female, age 72, left hemisphere 28.4
2250 Female, age 67, right hemisphere 28.3
1933 Female, age 85, both hemispheres 28.1
2692 Male, age 74, both hemispheres 27.0
2693 Female, age 94, both hemispheres 26.9
2622 Female, age 67, right hemisphere 24.6
Perirhinal gyrus
nTPM: 30.2
1794 Male, age 80, right hemisphere 32.7
1847 Female, age 91, left hemisphere 32.6
1841 Female, age 85, right hemisphere 31.0
2848 Male, age 76, right hemisphere 27.4
2521 Female, age 94, right hemisphere 27.2
Subiculum
nTPM: 30.1
1901 Male, age 80, both hemispheres 35.2
2619 Male, age 74, both hemispheres 31.3
2042 Male, age 76, both hemispheres 30.5
1977 Female, age 85, both hemispheres 29.7
2729 Female, age 91, right hemisphere 27.0
2438 Female, age 94, left hemisphere 26.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.2
Samples: 197

Max nTPM: 64.2
Min nTPM: 23.6
Std nTPM: 7.2
Median nTPM: 36.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 64.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 58.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 57.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 57.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 55.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 54.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 53.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 53.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 53.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 52.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 159.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 159.8
FF:10169-103B7 60 years, female 208.2
FF:10153-102I9 76 years, female 111.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.9
Samples: 4

Max nTPM: 24.8
Min nTPM: 16.7
Sample A Female 24.8
Sample B Female 19.4
Sample C Male 18.8
Sample D Male 16.7
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 19.3
Min nTPM: 15.2
Sample A Female 17.6
Sample B Female 19.3
Sample C Male 16.4
Sample D Male 15.2
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 23.4
Min nTPM: 16.9
Sample A Female 23.4
Sample B Female 17.4
Sample C Male 17.0
Sample D Male 16.9
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 21.1
Min nTPM: 15.3
Sample A Female 18.6
Sample B Female 15.3
Sample C Male 17.2
Sample D Male 21.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 80.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.3
Samples: 4

Max nTPM: 67.8
Min nTPM: 60.8
Sample A Male 60.8
Sample B Male 65.5
Sample C Female 67.8
Sample D Female 62.9
Hippocampal formation
nTPM: 80.3
Samples: 4

Max nTPM: 86.4
Min nTPM: 74.6
Sample A Male 78.0
Sample B Male 82.0
Sample C Female 86.4
Sample D Female 74.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
564641 Antisense, RP_040826_01_A09, Mouse strain C57BL/6J (56 days, male) 0.0

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