HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.5 nTPM
HPA:12.5 nTPM
GTEx:12.3 nTPM
FANTOM5:17.9 Scaled Tags Per Million
Pig:12.1 nTPM
Mouse:10.4 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041656Antibody HPA041799
Glial cells MediumNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 12.1
1898 Male, age 80, left hemisphere 12.7
2621 Female, age 67, right hemisphere 12.6
1855 Male, age 76, left hemisphere 12.3
1911 Female, age 85, right hemisphere 11.7
2148 Female, age 91, left hemisphere 11.6
2529 Female, age 94, left hemisphere 11.5
Dentate gyrus
nTPM: 12.0
2531 Female, age 67, both hemispheres 12.8
1927 Female, age 91, both hemispheres 12.5
2528 Male, age 74, both hemispheres 12.4
2010 Male, age 76, both hemispheres 11.8
2246 Female, age 85, both hemispheres 11.7
2530 Female, age 94, left hemisphere 10.9
Entorhinal gyrus
nTPM: 12.2
2686 Male, age 75, right hemisphere 13.7
2117 Female, age 91, right hemisphere 12.9
2613 Female, age 94, left hemisphere 12.3
1787 Male, age 76, left hemisphere 11.8
1938 Female, age 85, left hemisphere 11.8
2764 Male, age 80, right hemisphere 10.9
Hippocampus, CA1
nTPM: 11.8
2527 Male, age 74, both hemispheres 12.4
2749 Male, age 80, left hemisphere 12.3
1873 Female, age 85, both hemispheres 11.7
2082 Female, age 91, right hemisphere 11.4
2045 Male, age 76, both hemispheres 11.3
Hippocampus, CA2
nTPM: 11.9
1892 Male, age 76, both hemispheres 12.8
1940 Female, age 85, left hemisphere 12.1
2113 Female, age 91, right hemisphere 12.1
2249 Male, age 74, both hemispheres 11.9
2437 Female, age 94, left hemisphere 11.6
1963 Male, age 80, left hemisphere 11.1
Hippocampus, CA3
nTPM: 12.5
2620 Female, age 94, left hemisphere 14.1
2861 Female, age 67, both hemispheres 12.7
1867 Male, age 76, both hemispheres 12.1
2436 Male, age 74, both hemispheres 12.1
2137 Male, age 80, left hemisphere 12.0
1891 Female, age 85, both hemispheres 11.9
Parahippocampal cortex
nTPM: 12.2
2532 Female, age 72, left hemisphere 13.0
2622 Female, age 67, right hemisphere 13.0
2018 Male, age 76, both hemispheres 12.4
2245 Female, age 91, both hemispheres 12.3
2693 Female, age 94, both hemispheres 12.2
1990 Female, age 91, right hemisphere 12.1
2692 Male, age 74, both hemispheres 11.9
2250 Female, age 67, right hemisphere 11.8
1850 Male, age 80, both hemispheres 11.5
1933 Female, age 85, both hemispheres 11.5
Perirhinal gyrus
nTPM: 11.7
1794 Male, age 80, right hemisphere 12.0
1841 Female, age 85, right hemisphere 11.8
1847 Female, age 91, left hemisphere 11.7
2521 Female, age 94, right hemisphere 11.6
2848 Male, age 76, right hemisphere 11.3
Subiculum
nTPM: 12.5
2619 Male, age 74, both hemispheres 13.4
2438 Female, age 94, left hemisphere 12.9
2042 Male, age 76, both hemispheres 12.6
1901 Male, age 80, both hemispheres 12.4
2729 Female, age 91, right hemisphere 12.1
1977 Female, age 85, both hemispheres 11.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.3
Samples: 197

Max nTPM: 23.6
Min nTPM: 6.0
Std nTPM: 2.5
Median nTPM: 11.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 23.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 18.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 18.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 18.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 17.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 17.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 17.5
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 17.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 17.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 17.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.9
FF:10169-103B7 60 years, female 21.9
FF:10153-102I9 76 years, female 14.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.2
Sample A Female 9.3
Sample B Female 8.1
Sample C Male 7.8
Sample D Male 7.2
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.1
Sample A Female 11.6
Sample B Female 13.9
Sample C Male 11.1
Sample D Male 11.7
Subiculum
nTPM: 8.7
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.3
Sample A Female 11.1
Sample B Female 8.1
Sample C Male 8.2
Sample D Male 7.3
Ventral hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 10.5
Min nTPM: 6.2
Sample A Female 6.6
Sample B Female 6.2
Sample C Male 8.5
Sample D Male 10.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 8.8
Min nTPM: 7.8
Sample A Male 7.8
Sample B Male 8.8
Sample C Female 8.6
Sample D Female 7.9
Hippocampal formation
nTPM: 10.4
Samples: 4

Max nTPM: 11.5
Min nTPM: 8.6
Sample A Male 11.5
Sample B Male 8.6
Sample C Female 10.5
Sample D Female 10.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69838605 Antisense, RP_050310_02_C01, Mouse strain C57BL/6J (56 days, male) 2.4
74819687 Antisense, RP_060315_02_H03, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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