HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.2 nTPM
HPA:33.2 nTPM
GTEx:29.0 nTPM
FANTOM5:25.7 Scaled Tags Per Million
Pig:8.1 nTPM
Mouse:34.4 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001330
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.2
Sample id Sample description nTPM
Hippocampus
nTPM: 31.6
2529 Female, age 94, left hemisphere 32.7
1855 Male, age 76, left hemisphere 32.5
2621 Female, age 67, right hemisphere 31.8
1898 Male, age 80, left hemisphere 31.1
2148 Female, age 91, left hemisphere 30.8
1911 Female, age 85, right hemisphere 30.5
Dentate gyrus
nTPM: 31.5
2530 Female, age 94, left hemisphere 35.7
2010 Male, age 76, both hemispheres 32.3
2528 Male, age 74, both hemispheres 31.3
2246 Female, age 85, both hemispheres 30.6
2531 Female, age 67, both hemispheres 30.2
1927 Female, age 91, both hemispheres 29.2
Entorhinal gyrus
nTPM: 33.2
1787 Male, age 76, left hemisphere 35.7
2686 Male, age 75, right hemisphere 34.5
2764 Male, age 80, right hemisphere 32.8
1938 Female, age 85, left hemisphere 32.4
2613 Female, age 94, left hemisphere 32.3
2117 Female, age 91, right hemisphere 31.8
Hippocampus, CA1
nTPM: 31.7
2749 Male, age 80, left hemisphere 34.3
2045 Male, age 76, both hemispheres 33.3
2527 Male, age 74, both hemispheres 30.8
2082 Female, age 91, right hemisphere 30.2
1873 Female, age 85, both hemispheres 30.0
Hippocampus, CA2
nTPM: 32.1
1892 Male, age 76, both hemispheres 33.5
1940 Female, age 85, left hemisphere 32.8
1963 Male, age 80, left hemisphere 32.2
2113 Female, age 91, right hemisphere 31.7
2437 Female, age 94, left hemisphere 31.6
2249 Male, age 74, both hemispheres 30.5
Hippocampus, CA3
nTPM: 32.0
1867 Male, age 76, both hemispheres 35.9
2137 Male, age 80, left hemisphere 32.9
1891 Female, age 85, both hemispheres 31.6
2620 Female, age 94, left hemisphere 31.0
2436 Male, age 74, both hemispheres 30.6
2861 Female, age 67, both hemispheres 29.8
Parahippocampal cortex
nTPM: 31.6
2018 Male, age 76, both hemispheres 33.5
1850 Male, age 80, both hemispheres 32.8
2692 Male, age 74, both hemispheres 32.5
2532 Female, age 72, left hemisphere 32.2
2245 Female, age 91, both hemispheres 32.0
2250 Female, age 67, right hemisphere 31.3
1990 Female, age 91, right hemisphere 30.9
1933 Female, age 85, both hemispheres 30.7
2622 Female, age 67, right hemisphere 30.6
2693 Female, age 94, both hemispheres 29.7
Perirhinal gyrus
nTPM: 32.0
1794 Male, age 80, right hemisphere 33.1
1841 Female, age 85, right hemisphere 32.4
1847 Female, age 91, left hemisphere 32.1
2848 Male, age 76, right hemisphere 31.4
2521 Female, age 94, right hemisphere 31.1
Subiculum
nTPM: 32.0
2042 Male, age 76, both hemispheres 32.8
1901 Male, age 80, both hemispheres 32.6
2438 Female, age 94, left hemisphere 32.6
2619 Male, age 74, both hemispheres 32.5
1977 Female, age 85, both hemispheres 32.3
2729 Female, age 91, right hemisphere 29.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.0
Samples: 197

Max nTPM: 59.1
Min nTPM: 18.8
Std nTPM: 6.1
Median nTPM: 28.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 59.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 49.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 47.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 45.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 44.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 43.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 43.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 42.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 40.8
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 40.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 40.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.7
FF:10153-102I9 76 years, female 36.9
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 7.7
Min nTPM: 7.1
Sample A Female 7.2
Sample B Female 7.1
Sample C Male 7.1
Sample D Male 7.7
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 9.1
Min nTPM: 7.3
Sample A Female 7.9
Sample B Female 7.3
Sample C Male 8.0
Sample D Male 9.1
Subiculum
nTPM: 7.6
Samples: 4

Max nTPM: 8.1
Min nTPM: 7.0
Sample A Female 7.0
Sample B Female 7.5
Sample C Male 7.7
Sample D Male 8.1
Ventral hippocampus
nTPM: 7.1
Samples: 4

Max nTPM: 7.5
Min nTPM: 6.7
Sample A Female 6.8
Sample B Female 7.5
Sample C Male 6.7
Sample D Male 7.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.4
Samples: 4

Max nTPM: 36.8
Min nTPM: 31.7
Sample A Male 36.8
Sample B Male 36.8
Sample C Female 31.7
Sample D Female 32.4
Hippocampal formation
nTPM: 34.2
Samples: 4

Max nTPM: 38.4
Min nTPM: 30.3
Sample A Male 30.3
Sample B Male 31.9
Sample C Female 36.3
Sample D Female 38.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
576415 Antisense, RP_040826_01_G01, Mouse strain C57BL/6J (56 days, male) 11.6

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