HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.4 nTPM
HPA:17.4 nTPM
GTEx:22.3 nTPM
FANTOM5:97.9 Scaled Tags Per Million
Pig:27.9 nTPM
Mouse:45.4 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004883
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.4
Sample id Sample description nTPM
Hippocampus
nTPM: 15.9
2621 Female, age 67, right hemisphere 17.4
1898 Male, age 80, left hemisphere 17.1
2529 Female, age 94, left hemisphere 16.6
2148 Female, age 91, left hemisphere 15.7
1911 Female, age 85, right hemisphere 14.3
1855 Male, age 76, left hemisphere 14.1
Dentate gyrus
nTPM: 16.0
2531 Female, age 67, both hemispheres 17.8
2246 Female, age 85, both hemispheres 16.4
2530 Female, age 94, left hemisphere 16.2
1927 Female, age 91, both hemispheres 15.9
2010 Male, age 76, both hemispheres 14.9
2528 Male, age 74, both hemispheres 14.6
Entorhinal gyrus
nTPM: 17.0
2686 Male, age 75, right hemisphere 19.7
1787 Male, age 76, left hemisphere 18.1
1938 Female, age 85, left hemisphere 17.3
2764 Male, age 80, right hemisphere 16.5
2117 Female, age 91, right hemisphere 15.7
2613 Female, age 94, left hemisphere 14.5
Hippocampus, CA1
nTPM: 16.5
2749 Male, age 80, left hemisphere 19.6
1873 Female, age 85, both hemispheres 17.4
2045 Male, age 76, both hemispheres 17.2
2527 Male, age 74, both hemispheres 15.3
2082 Female, age 91, right hemisphere 13.3
Hippocampus, CA2
nTPM: 15.1
1892 Male, age 76, both hemispheres 17.9
2437 Female, age 94, left hemisphere 15.9
1940 Female, age 85, left hemisphere 14.6
1963 Male, age 80, left hemisphere 14.6
2113 Female, age 91, right hemisphere 13.8
2249 Male, age 74, both hemispheres 13.6
Hippocampus, CA3
nTPM: 15.3
2137 Male, age 80, left hemisphere 17.2
2861 Female, age 67, both hemispheres 16.1
2620 Female, age 94, left hemisphere 15.3
1867 Male, age 76, both hemispheres 15.2
1891 Female, age 85, both hemispheres 14.5
2436 Male, age 74, both hemispheres 13.4
Parahippocampal cortex
nTPM: 16.8
1850 Male, age 80, both hemispheres 19.3
2622 Female, age 67, right hemisphere 18.6
2245 Female, age 91, both hemispheres 18.4
2532 Female, age 72, left hemisphere 18.4
1933 Female, age 85, both hemispheres 16.7
2692 Male, age 74, both hemispheres 16.4
2250 Female, age 67, right hemisphere 16.0
2018 Male, age 76, both hemispheres 15.6
1990 Female, age 91, right hemisphere 14.5
2693 Female, age 94, both hemispheres 14.4
Perirhinal gyrus
nTPM: 17.4
1794 Male, age 80, right hemisphere 19.1
1841 Female, age 85, right hemisphere 18.3
2848 Male, age 76, right hemisphere 18.0
1847 Female, age 91, left hemisphere 16.5
2521 Female, age 94, right hemisphere 15.2
Subiculum
nTPM: 16.4
1901 Male, age 80, both hemispheres 18.0
2438 Female, age 94, left hemisphere 17.5
1977 Female, age 85, both hemispheres 16.9
2042 Male, age 76, both hemispheres 16.3
2619 Male, age 74, both hemispheres 15.5
2729 Female, age 91, right hemisphere 14.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.3
Samples: 197

Max nTPM: 59.3
Min nTPM: 11.2
Std nTPM: 7.4
Median nTPM: 20.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 59.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 45.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 42.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 42.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 41.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 40.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 40.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 39.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 38.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 37.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 37.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.9
FF:10169-103B7 60 years, female 120.3
FF:10153-102I9 76 years, female 75.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 29.2
Min nTPM: 25.6
Sample A Female 26.0
Sample B Female 25.6
Sample C Male 27.3
Sample D Male 29.2
Entorhinal cortex
nTPM: 27.8
Samples: 4

Max nTPM: 28.6
Min nTPM: 26.7
Sample A Female 26.7
Sample B Female 28.6
Sample C Male 27.5
Sample D Male 28.2
Subiculum
nTPM: 28.0
Samples: 4

Max nTPM: 30.5
Min nTPM: 26.6
Sample A Female 30.5
Sample B Female 26.6
Sample C Male 27.2
Sample D Male 27.5
Ventral hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 27.4
Min nTPM: 20.1
Sample A Female 25.7
Sample B Female 27.4
Sample C Male 20.1
Sample D Male 24.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.7
Samples: 4

Max nTPM: 48.3
Min nTPM: 41.1
Sample A Male 41.1
Sample B Male 44.7
Sample C Female 44.8
Sample D Female 48.3
Hippocampal formation
nTPM: 45.5
Samples: 4

Max nTPM: 46.9
Min nTPM: 44.1
Sample A Male 44.1
Sample B Male 46.9
Sample C Female 46.3
Sample D Female 44.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
71325270 Antisense, RP_050825_02_E04, Mouse strain C57BL/6J (56 days, male) 11.4

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