HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.2 nTPM
HPA:10.2 nTPM
GTEx:8.5 nTPM
FANTOM5:59.9 Scaled Tags Per Million
Pig:30.9 nTPM
Mouse:12.6 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001429Antibody CAB003836
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.2
Sample id Sample description nTPM
Hippocampus
nTPM: 9.1
1898 Male, age 80, left hemisphere 11.0
1911 Female, age 85, right hemisphere 10.6
1855 Male, age 76, left hemisphere 8.8
2529 Female, age 94, left hemisphere 8.7
2621 Female, age 67, right hemisphere 8.2
2148 Female, age 91, left hemisphere 7.0
Dentate gyrus
nTPM: 8.4
2010 Male, age 76, both hemispheres 9.9
2528 Male, age 74, both hemispheres 9.6
1927 Female, age 91, both hemispheres 9.4
2246 Female, age 85, both hemispheres 8.9
2531 Female, age 67, both hemispheres 6.5
2530 Female, age 94, left hemisphere 6.1
Entorhinal gyrus
nTPM: 8.0
2117 Female, age 91, right hemisphere 9.8
1787 Male, age 76, left hemisphere 9.0
1938 Female, age 85, left hemisphere 8.8
2764 Male, age 80, right hemisphere 8.5
2686 Male, age 75, right hemisphere 6.4
2613 Female, age 94, left hemisphere 5.3
Hippocampus, CA1
nTPM: 10.2
2749 Male, age 80, left hemisphere 15.3
1873 Female, age 85, both hemispheres 10.2
2527 Male, age 74, both hemispheres 9.1
2045 Male, age 76, both hemispheres 8.3
2082 Female, age 91, right hemisphere 8.1
Hippocampus, CA2
nTPM: 9.2
2249 Male, age 74, both hemispheres 11.2
1963 Male, age 80, left hemisphere 9.7
2113 Female, age 91, right hemisphere 9.4
1892 Male, age 76, both hemispheres 9.1
1940 Female, age 85, left hemisphere 9.0
2437 Female, age 94, left hemisphere 6.9
Hippocampus, CA3
nTPM: 9.3
2137 Male, age 80, left hemisphere 13.0
1891 Female, age 85, both hemispheres 10.4
2620 Female, age 94, left hemisphere 9.8
1867 Male, age 76, both hemispheres 9.3
2436 Male, age 74, both hemispheres 7.8
2861 Female, age 67, both hemispheres 5.2
Parahippocampal cortex
nTPM: 8.9
1850 Male, age 80, both hemispheres 10.7
2693 Female, age 94, both hemispheres 10.7
2018 Male, age 76, both hemispheres 10.1
2250 Female, age 67, right hemisphere 10.1
1990 Female, age 91, right hemisphere 9.1
1933 Female, age 85, both hemispheres 9.0
2245 Female, age 91, both hemispheres 8.5
2532 Female, age 72, left hemisphere 7.6
2692 Male, age 74, both hemispheres 7.1
2622 Female, age 67, right hemisphere 6.4
Perirhinal gyrus
nTPM: 9.9
1794 Male, age 80, right hemisphere 10.9
1841 Female, age 85, right hemisphere 10.2
2521 Female, age 94, right hemisphere 9.9
1847 Female, age 91, left hemisphere 9.5
2848 Male, age 76, right hemisphere 8.9
Subiculum
nTPM: 8.9
1901 Male, age 80, both hemispheres 11.0
1977 Female, age 85, both hemispheres 9.8
2042 Male, age 76, both hemispheres 9.6
2729 Female, age 91, right hemisphere 8.9
2438 Female, age 94, left hemisphere 7.5
2619 Male, age 74, both hemispheres 6.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.5
Samples: 197

Max nTPM: 15.8
Min nTPM: 4.4
Std nTPM: 1.7
Median nTPM: 8.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 15.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 15.3
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 13.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 13.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 12.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 12.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 12.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 12.0
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 11.9
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 11.7
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 11.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.9
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 48.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 30.6
Min nTPM: 29.7
Sample A Female 29.8
Sample B Female 30.2
Sample C Male 29.7
Sample D Male 30.6
Entorhinal cortex
nTPM: 30.9
Samples: 4

Max nTPM: 31.7
Min nTPM: 30.5
Sample A Female 30.5
Sample B Female 31.7
Sample C Male 30.9
Sample D Male 30.6
Subiculum
nTPM: 29.5
Samples: 4

Max nTPM: 31.9
Min nTPM: 28.3
Sample A Female 31.9
Sample B Female 28.4
Sample C Male 28.3
Sample D Male 29.4
Ventral hippocampus
nTPM: 28.6
Samples: 4

Max nTPM: 33.7
Min nTPM: 22.5
Sample A Female 33.7
Sample B Female 30.8
Sample C Male 22.5
Sample D Male 27.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 13.5
Min nTPM: 11.5
Sample A Male 12.1
Sample B Male 13.5
Sample C Female 13.3
Sample D Female 11.5
Hippocampal formation
nTPM: 10.0
Samples: 4

Max nTPM: 11.2
Min nTPM: 9.4
Sample A Male 11.2
Sample B Male 9.4
Sample C Female 9.6
Sample D Female 9.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
69262299 Antisense, RP_050303_01_G05, Mouse strain C57BL/6J (56 days, male) 4.0

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