HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:22.2 nTPM
HPA:22.2 nTPM
GTEx:39.4 nTPM
FANTOM5:17.9 Scaled Tags Per Million
Pig:36.9 nTPM
Mouse:73.8 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.2
Sample id Sample description nTPM
Hippocampus
nTPM: 18.3
1898 Male, age 80, left hemisphere 20.4
2621 Female, age 67, right hemisphere 19.4
1911 Female, age 85, right hemisphere 19.0
2148 Female, age 91, left hemisphere 17.6
1855 Male, age 76, left hemisphere 16.7
2529 Female, age 94, left hemisphere 16.6
Dentate gyrus
nTPM: 18.2
1927 Female, age 91, both hemispheres 20.6
2246 Female, age 85, both hemispheres 19.4
2010 Male, age 76, both hemispheres 18.3
2530 Female, age 94, left hemisphere 17.4
2531 Female, age 67, both hemispheres 17.0
2528 Male, age 74, both hemispheres 16.5
Entorhinal gyrus
nTPM: 19.1
2764 Male, age 80, right hemisphere 22.3
2613 Female, age 94, left hemisphere 21.9
1938 Female, age 85, left hemisphere 18.9
1787 Male, age 76, left hemisphere 18.8
2686 Male, age 75, right hemisphere 17.1
2117 Female, age 91, right hemisphere 15.5
Hippocampus, CA1
nTPM: 20.1
2749 Male, age 80, left hemisphere 29.5
2527 Male, age 74, both hemispheres 19.4
1873 Female, age 85, both hemispheres 17.9
2045 Male, age 76, both hemispheres 17.2
2082 Female, age 91, right hemisphere 16.7
Hippocampus, CA2
nTPM: 19.4
2437 Female, age 94, left hemisphere 21.5
1892 Male, age 76, both hemispheres 20.9
1963 Male, age 80, left hemisphere 20.8
2249 Male, age 74, both hemispheres 18.2
2113 Female, age 91, right hemisphere 17.8
1940 Female, age 85, left hemisphere 17.4
Hippocampus, CA3
nTPM: 19.2
2137 Male, age 80, left hemisphere 25.1
1867 Male, age 76, both hemispheres 19.8
2620 Female, age 94, left hemisphere 19.3
1891 Female, age 85, both hemispheres 18.0
2436 Male, age 74, both hemispheres 17.9
2861 Female, age 67, both hemispheres 15.0
Parahippocampal cortex
nTPM: 19.3
2245 Female, age 91, both hemispheres 22.4
1933 Female, age 85, both hemispheres 21.5
1990 Female, age 91, right hemisphere 21.5
1850 Male, age 80, both hemispheres 20.8
2250 Female, age 67, right hemisphere 20.8
2532 Female, age 72, left hemisphere 19.2
2018 Male, age 76, both hemispheres 17.8
2692 Male, age 74, both hemispheres 17.5
2693 Female, age 94, both hemispheres 16.1
2622 Female, age 67, right hemisphere 15.7
Perirhinal gyrus
nTPM: 22.2
1847 Female, age 91, left hemisphere 26.2
1794 Male, age 80, right hemisphere 24.9
2521 Female, age 94, right hemisphere 21.6
1841 Female, age 85, right hemisphere 21.0
2848 Male, age 76, right hemisphere 17.4
Subiculum
nTPM: 18.4
1901 Male, age 80, both hemispheres 21.4
1977 Female, age 85, both hemispheres 19.6
2438 Female, age 94, left hemisphere 19.6
2619 Male, age 74, both hemispheres 19.4
2042 Male, age 76, both hemispheres 15.4
2729 Female, age 91, right hemisphere 15.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.4
Samples: 197

Max nTPM: 129.9
Min nTPM: 6.7
Std nTPM: 20.0
Median nTPM: 37.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 129.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 101.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 98.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 97.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 90.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 88.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 84.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 84.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 83.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 81.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 79.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.9
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 9.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.0
Samples: 4

Max nTPM: 50.6
Min nTPM: 22.6
Sample A Female 50.6
Sample B Female 35.5
Sample C Male 35.3
Sample D Male 22.6
Entorhinal cortex
nTPM: 36.9
Samples: 4

Max nTPM: 38.5
Min nTPM: 34.3
Sample A Female 36.7
Sample B Female 38.2
Sample C Male 38.5
Sample D Male 34.3
Subiculum
nTPM: 31.6
Samples: 4

Max nTPM: 46.8
Min nTPM: 22.0
Sample A Female 46.8
Sample B Female 29.9
Sample C Male 27.8
Sample D Male 22.0
Ventral hippocampus
nTPM: 32.4
Samples: 4

Max nTPM: 42.6
Min nTPM: 24.3
Sample A Female 25.7
Sample B Female 24.3
Sample C Male 36.8
Sample D Male 42.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.8
Samples: 4

Max nTPM: 81.6
Min nTPM: 67.8
Sample A Male 74.3
Sample B Male 81.6
Sample C Female 67.8
Sample D Female 71.4
Hippocampal formation
nTPM: 70.8
Samples: 4

Max nTPM: 77.3
Min nTPM: 66.1
Sample A Male 77.3
Sample B Male 66.6
Sample C Female 66.1
Sample D Female 73.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
73617678 Antisense, RP_051130_02_D08, Mouse strain C57BL/6J (56 days, male) 5.8

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