HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.2 nTPM
HPA:42.2 nTPM
GTEx:46.3 nTPM
FANTOM5:14.7 Scaled Tags Per Million
Pig:11.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035303
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.2
Sample id Sample description nTPM
Hippocampus
nTPM: 42.2
2148 Female, age 91, left hemisphere 44.9
1855 Male, age 76, left hemisphere 43.2
1911 Female, age 85, right hemisphere 43.0
2529 Female, age 94, left hemisphere 40.9
2621 Female, age 67, right hemisphere 40.7
1898 Male, age 80, left hemisphere 40.6
Dentate gyrus
nTPM: 42.0
2531 Female, age 67, both hemispheres 45.4
2010 Male, age 76, both hemispheres 42.4
2246 Female, age 85, both hemispheres 41.3
2528 Male, age 74, both hemispheres 41.2
2530 Female, age 94, left hemisphere 41.1
1927 Female, age 91, both hemispheres 40.3
Entorhinal gyrus
nTPM: 40.9
2117 Female, age 91, right hemisphere 42.4
1787 Male, age 76, left hemisphere 41.7
2686 Male, age 75, right hemisphere 41.6
2764 Male, age 80, right hemisphere 40.9
2613 Female, age 94, left hemisphere 39.5
1938 Female, age 85, left hemisphere 39.4
Hippocampus, CA1
nTPM: 40.6
2045 Male, age 76, both hemispheres 45.1
1873 Female, age 85, both hemispheres 40.0
2082 Female, age 91, right hemisphere 40.0
2527 Male, age 74, both hemispheres 39.8
2749 Male, age 80, left hemisphere 37.9
Hippocampus, CA2
nTPM: 40.8
2437 Female, age 94, left hemisphere 42.3
1940 Female, age 85, left hemisphere 42.0
1892 Male, age 76, both hemispheres 40.7
2113 Female, age 91, right hemisphere 40.7
2249 Male, age 74, both hemispheres 40.3
1963 Male, age 80, left hemisphere 38.6
Hippocampus, CA3
nTPM: 41.4
2620 Female, age 94, left hemisphere 45.4
2861 Female, age 67, both hemispheres 42.2
2436 Male, age 74, both hemispheres 41.5
1867 Male, age 76, both hemispheres 41.3
1891 Female, age 85, both hemispheres 41.0
2137 Male, age 80, left hemisphere 36.6
Parahippocampal cortex
nTPM: 40.1
2622 Female, age 67, right hemisphere 42.1
2018 Male, age 76, both hemispheres 41.3
2532 Female, age 72, left hemisphere 40.8
2692 Male, age 74, both hemispheres 40.8
1933 Female, age 85, both hemispheres 40.1
1850 Male, age 80, both hemispheres 39.8
2693 Female, age 94, both hemispheres 39.6
2250 Female, age 67, right hemisphere 39.4
2245 Female, age 91, both hemispheres 38.7
1990 Female, age 91, right hemisphere 38.6
Perirhinal gyrus
nTPM: 39.8
1794 Male, age 80, right hemisphere 40.8
2848 Male, age 76, right hemisphere 40.7
1847 Female, age 91, left hemisphere 39.7
1841 Female, age 85, right hemisphere 39.1
2521 Female, age 94, right hemisphere 39.0
Subiculum
nTPM: 40.6
2042 Male, age 76, both hemispheres 42.2
2729 Female, age 91, right hemisphere 42.0
2619 Male, age 74, both hemispheres 41.2
1977 Female, age 85, both hemispheres 40.7
1901 Male, age 80, both hemispheres 40.5
2438 Female, age 94, left hemisphere 37.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.3
Samples: 197

Max nTPM: 87.8
Min nTPM: 24.1
Std nTPM: 9.5
Median nTPM: 45.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 87.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 81.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 78.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 67.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 67.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 66.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 66.1
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 62.5
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 62.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 62.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 61.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.7
FF:10153-102I9 76 years, female 20.0
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.3
Sample A Female 12.4
Sample B Female 10.9
Sample C Male 10.6
Sample D Male 9.3
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 10.5
Min nTPM: 8.6
Sample A Female 9.7
Sample B Female 10.5
Sample C Male 9.4
Sample D Male 8.6
Subiculum
nTPM: 10.4
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.2
Sample A Female 12.3
Sample B Female 9.6
Sample C Male 9.2
Sample D Male 10.3
Ventral hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 13.1
Min nTPM: 9.0
Sample A Female 10.6
Sample B Female 9.0
Sample C Male 13.1
Sample D Male 12.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.