HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.4 nTPM
HPA:35.4 nTPM
GTEx:36.9 nTPM
FANTOM5:50.2 Scaled Tags Per Million
Pig:27.9 nTPM
Mouse:44.9 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051261
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.4
Sample id Sample description nTPM
Hippocampus
nTPM: 34.5
1898 Male, age 80, left hemisphere 37.9
2148 Female, age 91, left hemisphere 35.3
2621 Female, age 67, right hemisphere 35.2
2529 Female, age 94, left hemisphere 34.2
1855 Male, age 76, left hemisphere 33.2
1911 Female, age 85, right hemisphere 31.5
Dentate gyrus
nTPM: 34.9
2530 Female, age 94, left hemisphere 40.9
2010 Male, age 76, both hemispheres 34.5
2531 Female, age 67, both hemispheres 34.0
2246 Female, age 85, both hemispheres 33.9
1927 Female, age 91, both hemispheres 33.6
2528 Male, age 74, both hemispheres 32.9
Entorhinal gyrus
nTPM: 34.8
2764 Male, age 80, right hemisphere 37.8
2613 Female, age 94, left hemisphere 36.2
1787 Male, age 76, left hemisphere 35.9
2117 Female, age 91, right hemisphere 34.2
2686 Male, age 75, right hemisphere 32.9
1938 Female, age 85, left hemisphere 31.7
Hippocampus, CA1
nTPM: 34.8
2749 Male, age 80, left hemisphere 41.3
2527 Male, age 74, both hemispheres 36.7
2045 Male, age 76, both hemispheres 32.3
2082 Female, age 91, right hemisphere 32.0
1873 Female, age 85, both hemispheres 31.8
Hippocampus, CA2
nTPM: 35.0
2437 Female, age 94, left hemisphere 37.6
1892 Male, age 76, both hemispheres 37.4
1963 Male, age 80, left hemisphere 35.2
2249 Male, age 74, both hemispheres 33.8
1940 Female, age 85, left hemisphere 33.1
2113 Female, age 91, right hemisphere 32.8
Hippocampus, CA3
nTPM: 35.4
2620 Female, age 94, left hemisphere 37.5
2861 Female, age 67, both hemispheres 36.6
2137 Male, age 80, left hemisphere 36.0
2436 Male, age 74, both hemispheres 36.0
1867 Male, age 76, both hemispheres 34.7
1891 Female, age 85, both hemispheres 31.8
Parahippocampal cortex
nTPM: 34.4
2245 Female, age 91, both hemispheres 37.9
2532 Female, age 72, left hemisphere 36.8
2250 Female, age 67, right hemisphere 35.9
2622 Female, age 67, right hemisphere 35.5
2692 Male, age 74, both hemispheres 34.6
1990 Female, age 91, right hemisphere 34.4
1850 Male, age 80, both hemispheres 34.1
1933 Female, age 85, both hemispheres 32.8
2693 Female, age 94, both hemispheres 31.6
2018 Male, age 76, both hemispheres 30.6
Perirhinal gyrus
nTPM: 35.2
1794 Male, age 80, right hemisphere 38.4
1847 Female, age 91, left hemisphere 37.2
2521 Female, age 94, right hemisphere 34.1
1841 Female, age 85, right hemisphere 33.4
2848 Male, age 76, right hemisphere 33.0
Subiculum
nTPM: 34.2
2619 Male, age 74, both hemispheres 36.8
1901 Male, age 80, both hemispheres 36.1
1977 Female, age 85, both hemispheres 34.7
2438 Female, age 94, left hemisphere 34.4
2729 Female, age 91, right hemisphere 32.3
2042 Male, age 76, both hemispheres 30.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.9
Samples: 197

Max nTPM: 59.4
Min nTPM: 16.8
Std nTPM: 8.3
Median nTPM: 35.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 59.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 58.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 57.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 56.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 56.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 55.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 55.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 53.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 53.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 53.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 52.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.2
FF:10169-103B7 60 years, female 58.5
FF:10153-102I9 76 years, female 41.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.9
Samples: 4

Max nTPM: 34.5
Min nTPM: 23.7
Sample A Female 34.5
Sample B Female 29.4
Sample C Male 23.9
Sample D Male 23.7
Entorhinal cortex
nTPM: 24.4
Samples: 4

Max nTPM: 25.8
Min nTPM: 23.6
Sample A Female 24.4
Sample B Female 23.6
Sample C Male 25.8
Sample D Male 23.6
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 28.3
Min nTPM: 21.4
Sample A Female 28.3
Sample B Female 22.3
Sample C Male 21.4
Sample D Male 22.0
Ventral hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 30.0
Min nTPM: 18.5
Sample A Female 24.5
Sample B Female 18.5
Sample C Male 28.8
Sample D Male 30.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.7
Samples: 4

Max nTPM: 42.5
Min nTPM: 37.3
Sample A Male 40.0
Sample B Male 39.0
Sample C Female 42.5
Sample D Female 37.3
Hippocampal formation
nTPM: 44.9
Samples: 4

Max nTPM: 45.6
Min nTPM: 44.4
Sample A Male 45.2
Sample B Male 44.4
Sample C Female 45.6
Sample D Female 44.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
68845765 Antisense, RP_050224_02_E02, Mouse strain C57BL/6J (56 days, male) 6.1

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