HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:93.6 nTPM
HPA:93.6 nTPM
GTEx:133.0 nTPM
FANTOM5:17.5 Scaled Tags Per Million
Pig:25.1 nTPM
Mouse:7.0 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018999
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.6
Sample id Sample description nTPM
Hippocampus
nTPM: 93.3
2529 Female, age 94, left hemisphere 101.6
2148 Female, age 91, left hemisphere 95.3
2621 Female, age 67, right hemisphere 93.1
1898 Male, age 80, left hemisphere 92.2
1911 Female, age 85, right hemisphere 90.4
1855 Male, age 76, left hemisphere 87.3
Dentate gyrus
nTPM: 92.4
2530 Female, age 94, left hemisphere 104.8
2531 Female, age 67, both hemispheres 99.2
2010 Male, age 76, both hemispheres 90.9
1927 Female, age 91, both hemispheres 87.1
2528 Male, age 74, both hemispheres 86.5
2246 Female, age 85, both hemispheres 86.1
Entorhinal gyrus
nTPM: 93.6
2117 Female, age 91, right hemisphere 104.0
2686 Male, age 75, right hemisphere 101.4
2764 Male, age 80, right hemisphere 92.9
1787 Male, age 76, left hemisphere 89.9
1938 Female, age 85, left hemisphere 87.2
2613 Female, age 94, left hemisphere 86.2
Hippocampus, CA1
nTPM: 88.7
2045 Male, age 76, both hemispheres 91.1
1873 Female, age 85, both hemispheres 90.2
2527 Male, age 74, both hemispheres 89.5
2082 Female, age 91, right hemisphere 87.7
2749 Male, age 80, left hemisphere 84.8
Hippocampus, CA2
nTPM: 89.5
2437 Female, age 94, left hemisphere 96.4
1940 Female, age 85, left hemisphere 92.8
1963 Male, age 80, left hemisphere 91.1
2113 Female, age 91, right hemisphere 88.5
1892 Male, age 76, both hemispheres 88.0
2249 Male, age 74, both hemispheres 80.1
Hippocampus, CA3
nTPM: 90.9
2861 Female, age 67, both hemispheres 105.1
1867 Male, age 76, both hemispheres 92.6
1891 Female, age 85, both hemispheres 89.8
2620 Female, age 94, left hemisphere 89.0
2436 Male, age 74, both hemispheres 85.0
2137 Male, age 80, left hemisphere 84.0
Parahippocampal cortex
nTPM: 87.2
2018 Male, age 76, both hemispheres 94.0
2245 Female, age 91, both hemispheres 90.9
2692 Male, age 74, both hemispheres 89.7
2622 Female, age 67, right hemisphere 88.2
1990 Female, age 91, right hemisphere 87.6
2532 Female, age 72, left hemisphere 86.3
1850 Male, age 80, both hemispheres 85.4
1933 Female, age 85, both hemispheres 84.0
2250 Female, age 67, right hemisphere 83.5
2693 Female, age 94, both hemispheres 82.5
Perirhinal gyrus
nTPM: 84.7
1841 Female, age 85, right hemisphere 86.8
1794 Male, age 80, right hemisphere 86.6
2848 Male, age 76, right hemisphere 84.4
2521 Female, age 94, right hemisphere 83.3
1847 Female, age 91, left hemisphere 82.4
Subiculum
nTPM: 89.9
2042 Male, age 76, both hemispheres 94.1
2438 Female, age 94, left hemisphere 92.0
1901 Male, age 80, both hemispheres 89.2
2729 Female, age 91, right hemisphere 88.7
2619 Male, age 74, both hemispheres 87.7
1977 Female, age 85, both hemispheres 87.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 133.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 133.0
Samples: 197

Max nTPM: 407.4
Min nTPM: 49.9
Std nTPM: 49.9
Median nTPM: 123.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 407.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 390.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 297.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 263.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 241.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 226.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 225.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 223.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 221.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 219.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 212.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.5
FF:10153-102I9 76 years, female 21.5
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 33.4
Min nTPM: 19.0
Sample A Female 33.4
Sample B Female 21.6
Sample C Male 26.5
Sample D Male 19.0
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 23.2
Min nTPM: 14.2
Sample A Female 16.8
Sample B Female 23.2
Sample C Male 22.0
Sample D Male 14.2
Subiculum
nTPM: 20.3
Samples: 4

Max nTPM: 28.2
Min nTPM: 16.3
Sample A Female 28.2
Sample B Female 18.8
Sample C Male 16.3
Sample D Male 17.9
Ventral hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 30.4
Min nTPM: 17.8
Sample A Female 21.3
Sample B Female 17.8
Sample C Male 30.4
Sample D Male 20.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 7.5
Min nTPM: 6.4
Sample A Male 7.5
Sample B Male 7.2
Sample C Female 7.0
Sample D Female 6.4
Hippocampal formation
nTPM: 6.4
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.3
Sample A Male 6.6
Sample B Male 5.3
Sample C Female 6.5
Sample D Female 7.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
68193067 Antisense, RP_040914_01_D05, Mouse strain C57BL/6J (56 days, male) 3.8

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