HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.2 nTPM
HPA:40.2 nTPM
GTEx:21.8 nTPM
FANTOM5:129.3 Scaled Tags Per Million
Pig:76.2 nTPM
Mouse:96.1 nTPM
Allen mouse:16.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008943Antibody HPA009083Antibody CAB025178
Glial cells MediumLowNot detected
Neuronal cells MediumLowNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.2
Sample id Sample description nTPM
Hippocampus
nTPM: 22.1
1898 Male, age 80, left hemisphere 29.7
2148 Female, age 91, left hemisphere 28.7
2621 Female, age 67, right hemisphere 22.8
1911 Female, age 85, right hemisphere 19.1
1855 Male, age 76, left hemisphere 17.0
2529 Female, age 94, left hemisphere 15.1
Dentate gyrus
nTPM: 31.8
2531 Female, age 67, both hemispheres 48.1
2530 Female, age 94, left hemisphere 35.6
1927 Female, age 91, both hemispheres 35.1
2010 Male, age 76, both hemispheres 30.5
2246 Female, age 85, both hemispheres 21.1
2528 Male, age 74, both hemispheres 20.3
Entorhinal gyrus
nTPM: 8.0
2764 Male, age 80, right hemisphere 16.4
1787 Male, age 76, left hemisphere 10.2
1938 Female, age 85, left hemisphere 7.8
2613 Female, age 94, left hemisphere 7.2
2686 Male, age 75, right hemisphere 5.5
2117 Female, age 91, right hemisphere 1.0
Hippocampus, CA1
nTPM: 40.2
2749 Male, age 80, left hemisphere 93.2
2045 Male, age 76, both hemispheres 32.9
1873 Female, age 85, both hemispheres 31.6
2082 Female, age 91, right hemisphere 24.5
2527 Male, age 74, both hemispheres 18.8
Hippocampus, CA2
nTPM: 18.4
1963 Male, age 80, left hemisphere 47.5
1892 Male, age 76, both hemispheres 22.0
2113 Female, age 91, right hemisphere 14.4
2437 Female, age 94, left hemisphere 10.0
2249 Male, age 74, both hemispheres 9.4
1940 Female, age 85, left hemisphere 7.4
Hippocampus, CA3
nTPM: 35.7
2620 Female, age 94, left hemisphere 72.4
2137 Male, age 80, left hemisphere 69.6
2861 Female, age 67, both hemispheres 35.6
1867 Male, age 76, both hemispheres 23.0
1891 Female, age 85, both hemispheres 9.4
2436 Male, age 74, both hemispheres 4.1
Parahippocampal cortex
nTPM: 8.2
2245 Female, age 91, both hemispheres 16.1
2018 Male, age 76, both hemispheres 14.1
1933 Female, age 85, both hemispheres 12.8
2250 Female, age 67, right hemisphere 12.4
2693 Female, age 94, both hemispheres 8.8
1850 Male, age 80, both hemispheres 6.7
2622 Female, age 67, right hemisphere 5.2
2532 Female, age 72, left hemisphere 4.4
1990 Female, age 91, right hemisphere 2.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 16.3
2521 Female, age 94, right hemisphere 25.8
1794 Male, age 80, right hemisphere 22.6
1847 Female, age 91, left hemisphere 13.6
1841 Female, age 85, right hemisphere 11.0
2848 Male, age 76, right hemisphere 8.4
Subiculum
nTPM: 11.0
2729 Female, age 91, right hemisphere 21.4
1977 Female, age 85, both hemispheres 18.3
1901 Male, age 80, both hemispheres 17.0
2042 Male, age 76, both hemispheres 9.2
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.8
Samples: 197

Max nTPM: 138.0
Min nTPM: 0.0
Std nTPM: 22.7
Median nTPM: 15.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 138.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 116.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 99.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 96.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 95.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 85.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 82.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 81.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 73.9
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 71.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 71.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 129.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 129.3
FF:10169-103B7 60 years, female 160.0
FF:10153-102I9 76 years, female 98.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 76.2
Samples: 4

Max nTPM: 98.7
Min nTPM: 44.4
Sample A Female 98.7
Sample B Female 98.5
Sample C Male 44.4
Sample D Male 63.3
Entorhinal cortex
nTPM: 47.2
Samples: 4

Max nTPM: 54.0
Min nTPM: 40.7
Sample A Female 50.2
Sample B Female 43.8
Sample C Male 54.0
Sample D Male 40.7
Subiculum
nTPM: 45.9
Samples: 4

Max nTPM: 61.3
Min nTPM: 33.6
Sample A Female 61.3
Sample B Female 41.9
Sample C Male 46.9
Sample D Male 33.6
Ventral hippocampus
nTPM: 66.1
Samples: 4

Max nTPM: 98.3
Min nTPM: 40.7
Sample A Female 56.0
Sample B Female 40.7
Sample C Male 69.3
Sample D Male 98.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 96.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.0
Samples: 4

Max nTPM: 77.3
Min nTPM: 65.8
Sample A Male 65.8
Sample B Male 73.7
Sample C Female 71.0
Sample D Female 77.3
Hippocampal formation
nTPM: 96.1
Samples: 4

Max nTPM: 106.6
Min nTPM: 86.6
Sample A Male 86.6
Sample B Male 106.6
Sample C Female 95.0
Sample D Female 96.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.7
73520989 Antisense, RP_051101_02_G08, Mouse strain C57BL/6J (56 days, male) 16.9
69735198 Antisense, RP_050503_02_C07, Mouse strain C57BL/6J (56 days, male) 16.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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