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PLA2G4C
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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
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Consensus:26.7 nTPM
HPA:26.7 nTPM
FANTOM5:59.4 Scaled Tags Per Million
Allen mouse:0.0 Expression energy

PONS - HPA Brain RNA-seq
Max nTPM 26.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 22.0
2188 Female, age 91, both hemispheres 30.7
2301 Female, age 85, both hemispheres 21.7
2090 Male, age 80, both hemispheres 21.0
1984 Male, age 76, both hemispheres 14.8
Dorsal cochlear nucleus
nTPM: 16.7
2187 Female, age 91, both hemispheres 17.7
2370 Male, age 61, both hemispheres 17.4
2802 Male, age 74, right hemisphere 16.9
2058 Male, age 76, both hemispheres 16.2
2378 Male, age 80, both hemispheres 15.5
Dorsal tegmental nucleus
nTPM: 17.3
2083 Male, age 80, both hemispheres 24.0
2326 Male, age 74, both hemispheres 16.8
1936 Male, age 76, left hemisphere 15.2
2358 Male, age 61, both hemispheres 13.1
Dorsolateral tegmental area
nTPM: 19.6
2751 Female, age 85, both hemispheres 29.2
2337 Male, age 61, both hemispheres 22.1
2654 Male, age 80, both hemispheres 20.3
2141 Male, age 76, both hemispheres 13.9
2360 Male, age 74, both hemispheres 12.6
Kolliker-Fuse nucleus
nTPM: 24.5
2793 Female, age 91, left hemisphere 39.3
2163 Male, age 80, both hemispheres 20.8
2315 Male, age 76, right hemisphere 13.3
Lateral lemniscal nuclei
nTPM: 25.7
2320 Female, age 91, left hemisphere 30.3
2746 Female, age 85, left hemisphere 30.0
2036 Male, age 80, both hemispheres 28.0
2453 Male, age 74, right hemisphere 26.8
2169 Male, age 76, both hemispheres 13.6
Lateral parabrachial nucleus
nTPM: 20.9
2792 Male, age 76, both hemispheres 26.9
2013 Male, age 80, both hemispheres 21.0
2790 Male, age 61, both hemispheres 18.0
2139 Female, age 85, right hemisphere 17.8
Lateral vestibular nucleus
nTPM: 16.4
2184 Male, age 76, both hemispheres 17.5
2311 Male, age 80, both hemispheres 15.4
Locus coeruleus
nTPM: 13.7
2014 Male, age 55, unknown 15.3
2162 Male, age 80, both hemispheres 14.5
2788 Male, age 74, unknown 14.1
2317 Female, age 72, unknown 13.9
1980 Male, age 76, both hemispheres 13.4
2123 Female, age 91, both hemispheres 12.8
2720 Male, age 74, both hemispheres 11.7
Medial olivary nucleus
nTPM: 20.6
1943 Male, age 61, both hemispheres 23.9
1962 Male, age 76, both hemispheres 20.6
2138 Female, age 91, both hemispheres 19.1
2851 Male, age 80, both hemispheres 18.7
Medial parabrachial nucleus
nTPM: 21.4
2463 Female, age 85, right hemisphere 26.3
2854 Male, age 80, both hemispheres 23.1
2170 Female, age 91, both hemispheres 21.3
2786 Male, age 76, both hemispheres 18.5
2156 Male, age 61, both hemispheres 17.7
Medial periolivary nuclei
nTPM: 23.7
2081 Male, age 80, both hemispheres 34.8
2458 Female, age 91, both hemispheres 30.2
2791 Male, age 74, right hemisphere 24.0
2171 Female, age 85, both hemispheres 19.6
2063 Male, age 76, both hemispheres 10.1
Motor facial nucleus
nTPM: 19.5
2365 Male, age 74, right hemisphere 25.2
2697 Female, age 85, both hemispheres 25.1
2126 Male, age 61, both hemispheres 19.4
2327 Male, age 80, both hemispheres 18.9
2795 Female, age 91, both hemispheres 16.9
2062 Male, age 76, both hemispheres 11.4
Motor trigeminal nucleus
nTPM: 23.3
2079 Male, age 80, both hemispheres 29.7
2560 Male, age 74, both hemispheres 29.6
2321 Female, age 91, both hemispheres 23.2
2309 Male, age 76, both hemispheres 19.5
2335 Male, age 61, both hemispheres 14.6
Nuclei of the trapezoid body
nTPM: 19.8
2368 Female, age 91, both hemispheres 25.4
2166 Male, age 80, both hemispheres 24.6
2159 Male, age 61, both hemispheres 22.7
2735 Female, age 85, both hemispheres 14.7
1983 Male, age 76, both hemispheres 11.5
Paramedian reticular nucleus
nTPM: 18.4
2057 Male, age 80, both hemispheres 19.9
2050 Female, age 85, both hemispheres 18.7
2052 Male, age 76, both hemispheres 18.0
2313 Male, age 61, both hemispheres 17.1
Pontine nuclei
nTPM: 26.7
2115 Male, age 80, left hemisphere 39.8
2454 Male, age 74, left hemisphere 32.9
2319 Female, age 91, both hemispheres 32.7
2727 Male, age 61, right hemisphere 25.5
2787 Female, age 85, both hemispheres 25.4
1863 Male, age 55, unknown 20.2
2109 Female, age 72, unknown 19.2
1968 Male, age 76, left hemisphere 17.8
Pontine raphe nucleus
nTPM: 17.4
2122 Female, age 85, midline 21.3
2853 Male, age 76, midline 13.5
Posteroventral cochlear nucleus
nTPM: 24.2
2135 Female, age 91, both hemispheres 43.9
2341 Male, age 80, both hemispheres 28.9
2070 Male, age 76, both hemispheres 18.9
2752 Female, age 85, both hemispheres 16.3
2371 Male, age 61, both hemispheres 13.3
Principal sensory trigeminal nucleus
nTPM: 22.2
2367 Female, age 91, left hemisphere 32.3
2008 Male, age 80, left hemisphere 26.6
2158 Male, age 61, both hemispheres 15.7
2324 Male, age 76, both hemispheres 14.2
Reticular pontine nucleus, caudal
nTPM: 24.3
2457 Female, age 91, both hemispheres 30.1
2332 Male, age 80, right hemisphere 29.1
2559 Male, age 74, both hemispheres 22.0
2092 Male, age 76, both hemispheres 16.2
Reticular pontine nucleus, oral
nTPM: 26.0
2361 Male, age 74, both hemispheres 38.6
2366 Female, age 91, both hemispheres 28.5
2012 Female, age 85, both hemispheres 23.3
1939 Male, age 80, both hemispheres 22.1
2167 Male, age 76, both hemispheres 17.4
Reticulotegmental nucleus
nTPM: 19.3
2333 Male, age 80, both hemispheres 22.3
2452 Male, age 74, both hemispheres 19.4
2322 Female, age 91, both hemispheres 19.3
2325 Male, age 76, both hemispheres 16.0
Spinal trigeminal nucleus, oral
nTPM: 17.3
2164 Male, age 80, both hemispheres 19.3
2737 Female, age 85, both hemispheres 17.7
1978 Male, age 76, both hemispheres 14.8
Subcoeruleus area
nTPM: 20.1
2369 Female, age 85, left hemisphere 30.8
2089 Male, age 76, left hemisphere 19.7
1958 Male, age 80, both hemispheres 18.2
2323 Female, age 91, left hemisphere 16.4
2451 Male, age 74, both hemispheres 15.5
Superior olive
nTPM: 25.3
2364 Male, age 74, right hemisphere 31.2
2020 Male, age 76, both hemispheres 24.2
2329 Male, age 80, right hemisphere 24.1
2561 Female, age 91, both hemispheres 24.1
1875 Female, age 85, both hemispheres 23.0
Superior vestibular nucleus
nTPM: 13.5
2061 Male, age 76, both hemispheres 14.1
2383 Male, age 74, both hemispheres 13.7
2015 Male, age 80, both hemispheres 12.6
Ventral periolivary nuclei
nTPM: 21.9
2794 Female, age 91, left hemisphere 28.5
2023 Male, age 76, both hemispheres 22.8
2165 Male, age 80, both hemispheres 20.0
2130 Female, age 85, both hemispheres 16.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 23.2
2840 Female, age 85, both hemispheres 30.5
2456 Female, age 91, both hemispheres 29.5
2449 Male, age 74, both hemispheres 25.2
2161 Male, age 80, both hemispheres 22.8
1959 Male, age 76, both hemispheres 18.2
2359 Male, age 61, both hemispheres 12.8

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 59.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 48.6
FF:10165-103B3 76 years, female 49.4
FF:10182-103D2 60 years, female 47.7
Pons
Scaled Tags Per Million: 59.4
FF:10033-101E6 18-54 years, mixed 59.4

PONS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Pons
Expression energy: 0.0
79912601 Antisense, RP_071204_04_E05, Mouse strain C57BL/6J (56 days, male) 0.0

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