HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:117.2 nTPM
HPA:117.2 nTPM
GTEx:111.7 nTPM
FANTOM5:27.2 Scaled Tags Per Million
Pig:33.6 nTPM
Mouse:46.3 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041504
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 117.2
Sample id Sample description nTPM
Hippocampus
nTPM: 113.2
1898 Male, age 80, left hemisphere 123.4
1855 Male, age 76, left hemisphere 116.4
2621 Female, age 67, right hemisphere 111.3
2529 Female, age 94, left hemisphere 110.7
2148 Female, age 91, left hemisphere 110.2
1911 Female, age 85, right hemisphere 107.3
Dentate gyrus
nTPM: 113.6
2530 Female, age 94, left hemisphere 118.7
1927 Female, age 91, both hemispheres 117.3
2010 Male, age 76, both hemispheres 115.9
2528 Male, age 74, both hemispheres 111.5
2246 Female, age 85, both hemispheres 109.5
2531 Female, age 67, both hemispheres 108.5
Entorhinal gyrus
nTPM: 109.9
1787 Male, age 76, left hemisphere 112.4
1938 Female, age 85, left hemisphere 111.5
2613 Female, age 94, left hemisphere 110.5
2117 Female, age 91, right hemisphere 109.7
2764 Male, age 80, right hemisphere 109.6
2686 Male, age 75, right hemisphere 105.5
Hippocampus, CA1
nTPM: 116.2
2749 Male, age 80, left hemisphere 126.9
2045 Male, age 76, both hemispheres 120.6
2527 Male, age 74, both hemispheres 113.8
1873 Female, age 85, both hemispheres 111.8
2082 Female, age 91, right hemisphere 107.6
Hippocampus, CA2
nTPM: 113.4
1963 Male, age 80, left hemisphere 120.4
2249 Male, age 74, both hemispheres 119.9
1892 Male, age 76, both hemispheres 116.8
2437 Female, age 94, left hemisphere 112.2
2113 Female, age 91, right hemisphere 106.6
1940 Female, age 85, left hemisphere 104.3
Hippocampus, CA3
nTPM: 117.2
2436 Male, age 74, both hemispheres 128.3
2620 Female, age 94, left hemisphere 119.9
2137 Male, age 80, left hemisphere 119.1
2861 Female, age 67, both hemispheres 116.4
1867 Male, age 76, both hemispheres 113.1
1891 Female, age 85, both hemispheres 106.0
Parahippocampal cortex
nTPM: 107.6
2250 Female, age 67, right hemisphere 112.4
1933 Female, age 85, both hemispheres 111.0
2622 Female, age 67, right hemisphere 108.8
2245 Female, age 91, both hemispheres 108.7
1850 Male, age 80, both hemispheres 107.8
2018 Male, age 76, both hemispheres 107.2
1990 Female, age 91, right hemisphere 106.4
2693 Female, age 94, both hemispheres 105.6
2532 Female, age 72, left hemisphere 104.9
2692 Male, age 74, both hemispheres 102.9
Perirhinal gyrus
nTPM: 110.3
1847 Female, age 91, left hemisphere 116.6
1794 Male, age 80, right hemisphere 112.5
1841 Female, age 85, right hemisphere 110.0
2521 Female, age 94, right hemisphere 106.7
2848 Male, age 76, right hemisphere 105.7
Subiculum
nTPM: 108.4
2729 Female, age 91, right hemisphere 110.6
1901 Male, age 80, both hemispheres 110.4
2042 Male, age 76, both hemispheres 110.0
1977 Female, age 85, both hemispheres 109.7
2619 Male, age 74, both hemispheres 108.5
2438 Female, age 94, left hemisphere 101.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 111.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 111.7
Samples: 197

Max nTPM: 184.0
Min nTPM: 60.3
Std nTPM: 24.2
Median nTPM: 111.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 184.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 178.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 173.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 172.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 169.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 169.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 163.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 163.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 162.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 161.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 159.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.2
FF:10169-103B7 60 years, female 31.3
FF:10153-102I9 76 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 49.0
Min nTPM: 22.7
Sample A Female 49.0
Sample B Female 29.6
Sample C Male 33.0
Sample D Male 22.7
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 25.4
Min nTPM: 16.7
Sample A Female 22.7
Sample B Female 25.4
Sample C Male 23.6
Sample D Male 16.7
Subiculum
nTPM: 22.6
Samples: 4

Max nTPM: 26.8
Min nTPM: 20.6
Sample A Female 26.8
Sample B Female 20.7
Sample C Male 22.2
Sample D Male 20.6
Ventral hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 35.2
Min nTPM: 19.8
Sample A Female 31.6
Sample B Female 19.8
Sample C Male 32.4
Sample D Male 35.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.2
Samples: 4

Max nTPM: 45.3
Min nTPM: 43.1
Sample A Male 45.3
Sample B Male 43.1
Sample C Female 45.0
Sample D Female 43.5
Hippocampal formation
nTPM: 46.3
Samples: 4

Max nTPM: 53.0
Min nTPM: 36.9
Sample A Male 44.1
Sample B Male 36.9
Sample C Female 51.2
Sample D Female 53.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68341466 Antisense, RP_041207_01_F03, Mouse strain C57BL/6J (56 days, male) 1.2

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