HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:81.8 nTPM
HPA:81.8 nTPM
GTEx:71.6 nTPM
FANTOM5:27.9 Scaled Tags Per Million
Pig:1.5 nTPM
Mouse:33.9 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019033Antibody HPA019167
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.8
Sample id Sample description nTPM
Hippocampus
nTPM: 60.7
2529 Female, age 94, left hemisphere 73.5
2621 Female, age 67, right hemisphere 67.8
1911 Female, age 85, right hemisphere 63.2
2148 Female, age 91, left hemisphere 56.0
1898 Male, age 80, left hemisphere 52.3
1855 Male, age 76, left hemisphere 51.5
Dentate gyrus
nTPM: 59.6
2530 Female, age 94, left hemisphere 69.8
2531 Female, age 67, both hemispheres 68.0
2246 Female, age 85, both hemispheres 61.4
2010 Male, age 76, both hemispheres 58.1
2528 Male, age 74, both hemispheres 53.4
1927 Female, age 91, both hemispheres 47.2
Entorhinal gyrus
nTPM: 81.8
2764 Male, age 80, right hemisphere 92.9
2686 Male, age 75, right hemisphere 92.3
2117 Female, age 91, right hemisphere 84.1
1938 Female, age 85, left hemisphere 75.4
2613 Female, age 94, left hemisphere 75.1
1787 Male, age 76, left hemisphere 71.1
Hippocampus, CA1
nTPM: 56.1
2082 Female, age 91, right hemisphere 63.5
2527 Male, age 74, both hemispheres 59.6
2749 Male, age 80, left hemisphere 54.9
1873 Female, age 85, both hemispheres 53.0
2045 Male, age 76, both hemispheres 49.3
Hippocampus, CA2
nTPM: 61.9
2437 Female, age 94, left hemisphere 68.7
1940 Female, age 85, left hemisphere 67.5
2113 Female, age 91, right hemisphere 64.9
1963 Male, age 80, left hemisphere 62.0
2249 Male, age 74, both hemispheres 56.9
1892 Male, age 76, both hemispheres 51.1
Hippocampus, CA3
nTPM: 56.8
1891 Female, age 85, both hemispheres 69.5
2861 Female, age 67, both hemispheres 59.1
1867 Male, age 76, both hemispheres 59.0
2620 Female, age 94, left hemisphere 54.3
2137 Male, age 80, left hemisphere 50.4
2436 Male, age 74, both hemispheres 48.3
Parahippocampal cortex
nTPM: 71.8
2532 Female, age 72, left hemisphere 84.0
2692 Male, age 74, both hemispheres 78.4
1850 Male, age 80, both hemispheres 76.9
2018 Male, age 76, both hemispheres 74.2
2622 Female, age 67, right hemisphere 73.3
1933 Female, age 85, both hemispheres 71.7
1990 Female, age 91, right hemisphere 69.2
2245 Female, age 91, both hemispheres 68.4
2693 Female, age 94, both hemispheres 63.9
2250 Female, age 67, right hemisphere 58.1
Perirhinal gyrus
nTPM: 69.5
1794 Male, age 80, right hemisphere 75.1
2848 Male, age 76, right hemisphere 73.4
1841 Female, age 85, right hemisphere 69.4
1847 Female, age 91, left hemisphere 65.4
2521 Female, age 94, right hemisphere 64.3
Subiculum
nTPM: 73.5
2042 Male, age 76, both hemispheres 84.2
2438 Female, age 94, left hemisphere 80.2
1901 Male, age 80, both hemispheres 76.9
1977 Female, age 85, both hemispheres 72.6
2619 Male, age 74, both hemispheres 69.6
2729 Female, age 91, right hemisphere 57.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.6
Samples: 197

Max nTPM: 177.7
Min nTPM: 9.5
Std nTPM: 30.9
Median nTPM: 66.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 177.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 174.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 167.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 165.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 164.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 148.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 142.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 142.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 135.6
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 134.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 128.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.9
FF:10153-102I9 76 years, female 39.1
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.5
Samples: 4

Max nTPM: 1.6
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 1.6
Sample C Male 1.6
Sample D Male 1.5
Entorhinal cortex
nTPM: 1.0
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.8
Sample A Female 1.2
Sample B Female 0.9
Sample C Male 1.0
Sample D Male 0.8
Subiculum
nTPM: 1.1
Samples: 4

Max nTPM: 1.5
Min nTPM: 0.8
Sample A Female 1.5
Sample B Female 1.2
Sample C Male 0.8
Sample D Male 1.0
Ventral hippocampus
nTPM: 1.4
Samples: 4

Max nTPM: 2.0
Min nTPM: 1.1
Sample A Female 1.2
Sample B Female 1.4
Sample C Male 2.0
Sample D Male 1.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.9
Samples: 4

Max nTPM: 44.5
Min nTPM: 23.5
Sample A Male 30.9
Sample B Male 36.6
Sample C Female 23.5
Sample D Female 44.5
Hippocampal formation
nTPM: 7.4
Samples: 4

Max nTPM: 10.8
Min nTPM: 3.7
Sample A Male 10.8
Sample B Male 6.1
Sample C Female 3.7
Sample D Female 8.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
71380983 Antisense, RP_050426_02_H07, Mouse strain C57BL/6J (56 days, male) 2.5

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